Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07502 ATGGGTGCGGCAGAAGATCTTGTGAACAATGCAGCTGGTGCTGCAGAGAATCCAGTAAACCACACCGCAAATCCTGTAAATGACAAAGCAGATTCTTCAGAAAATCCTGGAAAGAACAAAGAACCTGGTGCAGAAAATCCTGCAAGTGACAAAGCAGGTGGTGCAGTAAAACCTGTAGACAACCAAGCATGTAGTGCAGTAAATCCTGCAAATGACCAAGCAGGTGGTGCAAAAGATTCTGCATACGATAAAACATGTACTGCAGAAAATGCTATGAACGACAAAGCAGGTGACATAGAAAATCCTGTAAACAACAATGCAGATGGTGTAGAAAATCTTGTAGCAGACAAAACAGATTCTGCTGAAACCCCTGTTAACAGCAAAGATGATGCTGTTGAAACCCCTGTAAGCAACAAAGCAGACCGCCTTCCTGAAGAAGCAAAGGATTTACTGAAATCATTGGCAGATAAATGGGAGGATGTACTTGATGCAAGTGCGTTACAGGTGATCCCTCTCAAGGGGGCAATGACAAATGAGGTATTCCAGATAAAATGGCCAACTACTACAGGGGAAACCTCACGCAAGGTTATAGTTAGAATCTACGGTGTGGGTGTGGACATTTTCTTTGATAGGGCTGATGAGATTCGGACATTTGAATTCATGTCAAAGAATGGGCAGGGACCTCGTCTACTAGGACGTTTTACAAATGGCCGTATTGAAGAGTTTATCCATGCACGGACATTGTCAGCATCAGATCTACGTGATCCATCTATTTCTGCTCTTATAGCGGCCAAAATGAAGGAATTCCATGATCTAGATATGCCTGGTACAAAGAAAGTCCACCTTTGGGATATATTGAGAAATTGGCTTACTGAGGCCAAACGTTTGTCTTCCCCTCAAGAAGTTGAAGCCTTCTATTTGGACACAATTGACAAGGAAATTGCTATGTTGGAAAAGGAACTATCAGCTTCACACCAACGGATAGGATTTTGCCACAATGATTTACAATATGGTAACATAATGCTTGATGAAGAGACCAATTCTGTGACCATAATAGACTATGAATATGCAAGTTATAATCCTGTAGCATATGATATAGCAAACCACTTCTGTGAGATGGCTGCTAACTATCATACAGAAACACCTCATGTTCTTGATTACTATAAATATCCTGATTTTGAGGAGCGTCAAAGATTTGTGAAAGCATATTTGAGTTCCTCAGGTGAGGAACCAAGTGACAGTGAAATGGAGCACCTACTTCAAGAAGTTGAGAAGTATACACTTGCAAATCATCTATTCTGGGGCGTTTGGGGAATAATTTCGGCACAAGTGAACAAAATCGACTTTGACTACAAGGAGTATGCGAAACAGAGGTTTCAAGAGTATTGGGCAAGGAAACCTTATCTTTTAAGCTCTGACGCACCTTCTCCTTATAATGCGCCTGAGGGTACAGGAGAGCTAGCGACGGCATTGCCCACCAAAGGATCATCAACGAAGAGCGCTGGTATCTTCAGGAAGATGAAGAGAGTTTTGGGCCTCGGCTTGTTCAAGTCGAAAAGCTAG 1563 0.4223 MGAAEDLVNNAAGAAENPVNHTANPVNDKADSSENPGKNKEPGAENPASDKAGGAVKPVDNQACSAVNPANDQAGGAKDSAYDKTCTAENAMNDKAGDIENPVNNNADGVENLVADKTDSAETPVNSKDDAVETPVSNKADRLPEEAKDLLKSLADKWEDVLDASALQVIPLKGAMTNEVFQIKWPTTTGETSRKVIVRIYGVGVDIFFDRADEIRTFEFMSKNGQGPRLLGRFTNGRIEEFIHARTLSASDLRDPSISALIAAKMKEFHDLDMPGTKKVHLWDILRNWLTEAKRLSSPQEVEAFYLDTIDKEIAMLEKELSASHQRIGFCHNDLQYGNIMLDEETNSVTIIDYEYASYNPVAYDIANHFCEMAANYHTETPHVLDYYKYPDFEERQRFVKAYLSSSGEEPSDSEMEHLLQEVEKYTLANHLFWGVWGIISAQVNKIDFDYKEYAKQRFQEYWARKPYLLSSDAPSPYNAPEGTGELATALPTKGSSTKSAGIFRKMKRVLGLGLFKSKS. 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07502 520 CDD ETNK_euk 167 465 - -
Seca4g07502 520 PANTHER CHOLINE/ETHANOALAMINE KINASE 132 472 - -
Seca4g07502 520 MobiDBLite consensus disorder prediction 1 80 - -
Seca4g07502 520 MobiDBLite consensus disorder prediction 15 32 - -
Seca4g07502 520 Coils Coil 307 327 - -
Seca4g07502 520 Gene3D - 202 463 - -
Seca4g07502 520 Gene3D Phosphorylase Kinase; domain 1 155 242 - -
Seca4g07502 520 Pfam Choline/ethanolamine kinase 193 394 - -
Seca4g07502 520 SUPERFAMILY Protein kinase-like (PK-like) 135 469 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07502 Seca-Chr4 169343651 169351059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g07502 131 472 Acyl Lipid Metabolism Gene Families AT1G74320 69.298 0.0 517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g07502 4 169343651 169351059 Seca4g07502 4 169343651 169351059 ECH
Seca4g09766 4 229384327 229389925 Seca4g07502 4 169343651 169351059 PCT