Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07441 ATGGCTGAATTGGTGGCTCGAACGGGTCGGCATCAGCAGCGCTACGAGCATGGTTATCGCCTTATTGCCGGGTGTGTTCCATTTAGGTATAAAGATGCAGATGACTGCGGGGACTCTTGTTCTGAGAGGATTATTGAAGTGCTTATGATTAATTCATCTAGTGGACCAGGTCTTTTGTTTCCAAAGGGAGGTTGGGAGAATGATGAAACTGTTGAGGAGGCTGCTGTAAGAGAAGCTATTGAAGAAGCTGGAGTTCGAGGAGACCTAATGGATTTTCTTGGGTACTATGAATTTAGGAGTAAGACCCTCCGAGATGAGTTCAGTCCAGAAGGTTTATGTAAAGCAGCAATGTTTGCCTTGTTTGTCAAGGAGGAACTTGAGTCATGGCCTGAGCAAAGTACCAGAAAAAGGAGTTGGCTGGCTGTATCAGAGGCACTTCGAAGCTGCCGGCATGCATGGATGAGGGATGCCCTGCAATGCTTCTCCAAGTGGCATGAGGATAGGTTGCTGAGTGCAAGGGAGGATTTACCTCATCAAGACTGA 543 0.4733 MAELVARTGRHQQRYEHGYRLIAGCVPFRYKDADDCGDSCSERIIEVLMINSSSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGDLMDFLGYYEFRSKTLRDEFSPEGLCKAAMFALFVKEELESWPEQSTRKRSWLAVSEALRSCRHAWMRDALQCFSKWHEDRLLSAREDLPHQD. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07441 180 CDD Nudix_Hydrolase_9 23 155 IPR047198 GO:0016462
Seca4g07441 180 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Seca4g07441 180 SUPERFAMILY Nudix 5 164 IPR015797 -
Seca4g07441 180 FunFam Nudix hydrolase 16, mitochondrial 5 161 - -
Seca4g07441 180 ProSiteProfiles Nudix hydrolase domain profile. 18 162 IPR000086 -
Seca4g07441 180 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 164 - -
Seca4g07441 180 Pfam NUDIX domain 46 158 IPR000086 -
Seca4g07441 180 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07441 Seca-Chr4 167137262 167141327 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g07441 4 167137262 167141327 Seca4g07441 4 167137262 167141327 ECH