Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07433 ATGAAAACCACACTTTCACTCTCTTGTTCACTCCTGTTCCTGTTTTCCTCACTAGTCCAAGGACTGAACCCAAAATGTGATGCCCAGGATCATGGCTCAACCCTGCAAGTGTTCCATGTGTTCAGCCCATGTTCCCCATTTAGGCCATCAAAGGCACTTTCATGGGAAGAGAGTGTCCTCCAACTGCAAGCTAAGGACAAAACCAGGCTGCAGTTCCTGGATAGCTTGGTGGCTGGGAGGTCAATTGTACCAATTGCCTCTGGTAGACAGATCATACAGAGTCCAACTTACATTGTTAGAGCCAAAATAGGAACCCCACCTCAGACCTTGCTCTTGGCTATGGATACTAGCAATGATGCTGCTTGGATACCTTGCACTGCTTGTGATGGCTGCTCATCAACCTTGTTTGCTCCTGAAAAATCCACCACATTCAAGAATGTTAGCTGTGCTGCCCCTGAGTGCAAGCAGGAACATTTTCAGGTACCTAATCCCAATTGCGGTGTCAGCGCGTGCACTTTCAACCTTACCTATGGTAGCTCCTCCATTGCTGCTAACTTGGTCCAAGACACAATTACATTGGCCACTGACCCAGTTCCTGGCTACACCTTTGGTTGTGTTTCAAAGACCACTGGGACCTCTGCACCACCACAGGGGCTATTGGGCCTGGGCCGAGGCCCATTATCACTGTTGTCCCAGACCCAAAACCTCTATCAGTCCACATTCTCTTATTGCTTGCCCAGCTTCAAATCGCTTAACTTCTCTGGGTCGCTAAGACTTGGGCCTGTTGCTCAGCCCATAAGGATCAAGTATACCCCTCTTCTCAGGAACCCTAGAAGATCATCACTTTACTATGTCAACTTGGTTGCCATTAGGGTTGGCCGGAAAGTTGTTGATATCCCTCCCGAAGCATTGGCATTCAATCCAACCACCGGAGCCGGCACCATCTTTGATTCTGGTACGGTGTTCACCCGGCTAGTTGAACCGGCGTACGTGGCGGTCCGAGACGAGTTCCGGCGACGAGTTGGTGCAAATCTGACGGTGACAAGCCTAGGAGGGTTTGACACGTGTTACCCAGTCCCAATAGTTGCACCCACAATAACATTAATGTTCTCAGGCATGAACGTGACACTACCACAAGACAACCTCCTCATTCACAGCACTGTCGGCAGCACCACGTGTCTGGCCATGGCGGCGGCGCCAGAAAACGTGAACTCAGTGCTGAACGTGATAGCCAACATGCAGCAACAAAACCACCGTGTCCTCTTCGACGTTCCTAACTCAAGGCTTGGCGTTGCTCGTGAGCTTTGCACTAAATAA 1317 0.5019 MKTTLSLSCSLLFLFSSLVQGLNPKCDAQDHGSTLQVFHVFSPCSPFRPSKALSWEESVLQLQAKDKTRLQFLDSLVAGRSIVPIASGRQIIQSPTYIVRAKIGTPPQTLLLAMDTSNDAAWIPCTACDGCSSTLFAPEKSTTFKNVSCAAPECKQEHFQVPNPNCGVSACTFNLTYGSSSIAANLVQDTITLATDPVPGYTFGCVSKTTGTSAPPQGLLGLGRGPLSLLSQTQNLYQSTFSYCLPSFKSLNFSGSLRLGPVAQPIRIKYTPLLRNPRRSSLYYVNLVAIRVGRKVVDIPPEALAFNPTTGAGTIFDSGTVFTRLVEPAYVAVRDEFRRRVGANLTVTSLGGFDTCYPVPIVAPTITLMFSGMNVTLPQDNLLIHSTVGSTTCLAMAAAPENVNSVLNVIANMQQQNHRVLFDVPNSRLGVARELCTK. 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07433 438 PANTHER ASPARTYL PROTEASES 23 430 IPR001461 GO:0004190|GO:0006508
Seca4g07433 438 SUPERFAMILY Acid proteases 95 436 IPR021109 -
Seca4g07433 438 Gene3D Acid Proteases 262 438 IPR021109 -
Seca4g07433 438 Pfam Xylanase inhibitor N-terminal 97 260 IPR032861 -
Seca4g07433 438 FunFam aspartyl protease AED3 75 260 - -
Seca4g07433 438 Gene3D Acid Proteases 79 260 IPR021109 -
Seca4g07433 438 ProSiteProfiles Peptidase family A1 domain profile. 97 432 IPR033121 -
Seca4g07433 438 Pfam Xylanase inhibitor C-terminal 283 430 IPR032799 -
Seca4g07433 438 FunFam Aspartyl protease AED3 261 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07433 Seca-Chr4 166835344 166839911 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g07433 4 166835344 166839911 Seca4g07433 4 166835344 166839911 ECH