Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca4g07425 | ATGAGCAGAGAGCTGAACGGCATTGTAAAAGCCTGGGAAATAACGGTTCGCAAATCAGCTGGTGCAAAGAAAAGGGCAAACAGCATTTTCACACCAATGTCTGTGGCCCATGTAGACGATGATGAGTCAGCAGGGGCTGGAGAGGTGTGCCAACAAGTTGAGAAGATTCTCCCTAGTGGTGATTTCTACACAGGACAATGGCTTGACAAGTATCCTCATAGCCAGGGGAAATATCTGTGGACAGATGGGTGCATGTATGTTGGTGAATGGTGTAGAGGTAGCACCATGGGGAAAGGGAGGTTTAGTTGGCCTAGTGGTGCTACCTATGAAGGTGAATTCAAGAGTGGTTATATGGATGGTAAAGGCACTTATATAGGTTCTTCTGGGGATACCTATAAAGGGTCTTGGGTGATGAATTTGAAACATGGACATGGGACTGAGAGTTATCCCAATGGGGATTTCTATGATGGGGAGTGGAGGAAAGGGTTGCAGAATGGGCATGGGAGGTACCAATGGAAGAATGGGAACCATTACATTGGGCAGTGGAGGTATGGTTTGTTTAGTGGGAATGGGACATTGATGTGGCACAGTGGGAATAGGTATGATGGTTGTTGGGAAGAGGGGTTGCCTAAAGGGAATGGTACATTCAGGTGGGCTAATGGGAGTTTCTATGTTGGGGTTTGGAGTAAAGACCCTAAGGAGCAGAGTGGGACTTATTATCCATCTGGTTCTTCAGATGACCATTTGGAATGGGATCCTCAGGAAGTGTACTCTGTGGAATTGAGTAATTGTAAGATTTGTCCTTGTGAGGAAGTGTCAATTTATCCCTCACAGAAGACATTGAATGTGCCTAGTTTTGAGGAAGAGAACTTGCAGAAACAGCCAGTACATAAGAAGGGATGGAAGTCAGTGGATGGAAGGCTTAGTAATTACAGCTCTGAAGATGGGTCTTATGCTTTTGATGTAGGTAGGAAATCTGGCTTTGATGACTTGGGGGATAATTCTGTTCCAAGTTGGCGCAAATCACCTCAGTTGAGAATAAAGGCTCCTAAGAGGCAGGGACAGACCATATCTAAAGGGCATAAGAACTATGAGCTTATGTTGAATCTGCAGCTAGGTATCAGACATTCTGTTGGAAGACCTGCTCCAAGTGCATCTCTTGATTTGAAGGCTTCTGCATTTGACCCCAAAGAAAAAGTATGGACTAAATTTCCTCCAGAAGGATCCAAACACACGCCACCTCACCCATCTTGTGAATTTAGATGGAAAGATTACTGCCCGGTAGTATTCAGGGCTCTCAGAAAATTGTTCAAAGTTGATCCAGCTGATTACATGATATCAATATGTGGGAATGATGCCCTCCGGGAGCTTTCATCCCCTGGAAAAAGTGGAAGCTTTTTCTATTTGACCAATGATGACCGGTACATGATAAAGACCATGAAGAAAGCAGAAGTAAAAGTTTTTCTTAGAATGCTTCCTGCTTATTATAAACATGTCCGGGCTTTTGAGAACACTCTAGTCACCAAGTTCTTTGGCCTCCATTGTGTAAGACTAACAGGACCTGCACAGAAGAAGGTTCGCTTTGTCATCATGGGAAATCTATTCTGTTCTCAATATGCCATTCACAGGCGCTTTGACTTAAAAGGTTCAACCTTTGGTCGCACCACTGATAAACCTGAGTCAGAAATAGAGCCAACAACAACACTTAAGGACCTTGACTTAAATTTTATATTCCGGTTGCAGAAGTCGTGGTTCCAAGAATTCTGCAGGCAAGTGGATAGGGACTGTGACTTTCTTGAACAAGAGAGGATTATGGATTACAGTATGTTGGTGGGGCTTCACTTTCGAGAAACAACACCAACTGGCTCTGTTACACCTTGTGGTCGCAGTTCAGGAGGTTGCACTCCAACTGGCTTTGATGATGGTGGCCCTCGTCTCTCTGGAGTGGATCTAGATCATCTTATTGTAGATCCTAGTCGGTGGATTCAATTAGGTATAAACATGCCAGCAAGAGCTGAAATGACTGTGCGGAAAAGTAATTGTGACACTCCTCAACTAGTTGGAGAACCAACTGGGGAGTTCTATGAGATTATCATATTTTTTGGTATCATAGACATATTACAAGACTATGATATTAGTAAAAAGCTTGAGCATGCTTACAAATCATTCCAATATGATCCAACCTCAATCTCTGCTGTTGATCCAAGGCTATACTCAAAACGCTTTCGTGATTTCATCTTCAGAGTTTTTGTAGAGGACACTTAA | 2265 | 0.434 | MSRELNGIVKAWEITVRKSAGAKKRANSIFTPMSVAHVDDDESAGAGEVCQQVEKILPSGDFYTGQWLDKYPHSQGKYLWTDGCMYVGEWCRGSTMGKGRFSWPSGATYEGEFKSGYMDGKGTYIGSSGDTYKGSWVMNLKHGHGTESYPNGDFYDGEWRKGLQNGHGRYQWKNGNHYIGQWRYGLFSGNGTLMWHSGNRYDGCWEEGLPKGNGTFRWANGSFYVGVWSKDPKEQSGTYYPSGSSDDHLEWDPQEVYSVELSNCKICPCEEVSIYPSQKTLNVPSFEEENLQKQPVHKKGWKSVDGRLSNYSSEDGSYAFDVGRKSGFDDLGDNSVPSWRKSPQLRIKAPKRQGQTISKGHKNYELMLNLQLGIRHSVGRPAPSASLDLKASAFDPKEKVWTKFPPEGSKHTPPHPSCEFRWKDYCPVVFRALRKLFKVDPADYMISICGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVFLRMLPAYYKHVRAFENTLVTKFFGLHCVRLTGPAQKKVRFVIMGNLFCSQYAIHRRFDLKGSTFGRTTDKPESEIEPTTTLKDLDLNFIFRLQKSWFQEFCRQVDRDCDFLEQERIMDYSMLVGLHFRETTPTGSVTPCGRSSGGCTPTGFDDGGPRLSGVDLDHLIVDPSRWIQLGINMPARAEMTVRKSNCDTPQLVGEPTGEFYEIIIFFGIIDILQDYDISKKLEHAYKSFQYDPTSISAVDPRLYSKRFRDFIFRVFVEDT. | 755 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca4g07425 | 754 | Gene3D | Phosphatidylinositol Phosphate Kinase II Beta | 349 | 533 | IPR027484 | - | |
| Seca4g07425 | 754 | FunFam | Phosphatidylinositol 4-phosphate 5-kinase | 349 | 533 | - | - | |
| Seca4g07425 | 754 | Pfam | MORN repeat | 132 | 153 | IPR003409 | - | |
| Seca4g07425 | 754 | Pfam | MORN repeat | 63 | 85 | IPR003409 | - | |
| Seca4g07425 | 754 | Pfam | MORN repeat | 178 | 200 | IPR003409 | - | |
| Seca4g07425 | 754 | Pfam | MORN repeat | 201 | 222 | IPR003409 | - | |
| Seca4g07425 | 754 | Pfam | MORN repeat | 155 | 176 | IPR003409 | - | |
| Seca4g07425 | 754 | Pfam | MORN repeat | 86 | 107 | IPR003409 | - | |
| Seca4g07425 | 754 | Pfam | MORN repeat | 109 | 131 | IPR003409 | - | |
| Seca4g07425 | 754 | Gene3D | - | 47 | 92 | - | - | |
| Seca4g07425 | 754 | Gene3D | - | 93 | 137 | - | - | |
| Seca4g07425 | 754 | Gene3D | - | 138 | 190 | - | - | |
| Seca4g07425 | 754 | SUPERFAMILY | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 149 | 244 | - | - | |
| Seca4g07425 | 754 | Pfam | Phosphatidylinositol-4-phosphate 5-Kinase | 449 | 748 | IPR002498 | GO:0016307|GO:0046488 | |
| Seca4g07425 | 754 | SUPERFAMILY | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 58 | 162 | - | - | |
| Seca4g07425 | 754 | SUPERFAMILY | SAICAR synthase-like | 359 | 750 | - | - | |
| Seca4g07425 | 754 | CDD | PIPKc_AtPIP5K_like | 363 | 749 | - | - | |
| Seca4g07425 | 754 | PANTHER | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE | 72 | 751 | IPR023610 | - | |
| Seca4g07425 | 754 | Gene3D | - | 534 | 636 | - | - | |
| Seca4g07425 | 754 | Gene3D | - | 659 | 750 | - | - | |
| Seca4g07425 | 754 | SMART | morn | 176 | 197 | IPR003409 | - | |
| Seca4g07425 | 754 | SMART | morn | 130 | 151 | IPR003409 | - | |
| Seca4g07425 | 754 | SMART | morn | 153 | 174 | IPR003409 | - | |
| Seca4g07425 | 754 | SMART | morn | 107 | 128 | IPR003409 | - | |
| Seca4g07425 | 754 | SMART | morn | 61 | 82 | IPR003409 | - | |
| Seca4g07425 | 754 | SMART | morn | 84 | 105 | IPR003409 | - | |
| Seca4g07425 | 754 | SMART | morn | 199 | 220 | IPR003409 | - | |
| Seca4g07425 | 754 | MobiDBLite | consensus disorder prediction | 333 | 354 | - | - | |
| Seca4g07425 | 754 | SMART | PIPK_2 | 390 | 751 | IPR002498 | GO:0016307|GO:0046488 | |
| Seca4g07425 | 754 | PIRSF | PIP5K_plant | 6 | 754 | IPR017163 | GO:0005524|GO:0016308 | |
| Seca4g07425 | 754 | ProSiteProfiles | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 356 | 750 | IPR002498 | GO:0016307|GO:0046488 | |
| Seca4g07425 | 754 | FunFam | Phosphatidylinositol 4-phosphate 5-kinase | 93 | 137 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Seca4g07425 | Seca-Chr4 | 166626328 | 166631697 | Dispersed/Wgd |