Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g07424 ATGAGTATGTTAGGCCTTAGAGACCTAGTTCTCATAGCTCCAACCCCTTCCTTGCATCAACAACACCAAGGCCAACCCATTTCACAAGACCATAATTCCAACCTTCCTCTGCCTTCATCAACTGCTCTCAGCGTTGGGTTTGGCATTTTTCCACTCCTAACTGCCACACCCTGCATGCCACAAACACAGAACAATGAGGTTCAAGAGTGTAACAACAACACCAACAACACAAACAACAACAACAGTAGCATCAATTATTGGAACCTTAAGATGTGCCCAGAAGTAAATCCTCCAAAAAAAGGAGTGATCAACGTGGATGATGAGAGCCACAACAAGCTCATGATGGAGAGTGAAGAAAACGGAGTCTATGGTGCTGATTTCAGGGTGTGTCAAGATTGTGGTAACAGAGCAAAGAAAGATTGCCTTTATAGAAGATGCAGAACTTGTTGCAAAGGACGTGGATATGACTGCAACACTCACGTGAAGAGCACGTGGGTTCCTTCAATTCGCCGCCGGGAGCGTGAGATGGCGGTAGTTTCCGCCGCCGGTGGTGGTGATGGAGCTAAGAGGCCAAGACCTTTAGTGGGGTCATCACACAATGCCACTGCCACTTCTCATAGTTCTAACTCTAATGCTACCACTTGTCACCAAGATGCTGGCTTCAAAGAGTCTTTACCAGGTCATGTTCGTGCACCTGCTGTGTTCAGGTGCCATAGAGTCACTGCTATTGGCAATGGTGAAGATGAATTTGCCTACATGGCTACGGTTCATATAAGTGGCCATGTGTTCAAGGGGTTTCTTTATGATTATGGTGTTGATGGGAAAAATGCAATGCCTTGTGTTTCAGAATTGCAACTGGGAAATGGAAGGAATGGGGAATGTTCTTCTGCAATTGGGGTTCCAACCACTAATGCCTACCCTGCTTCTGCTAGCTGA 936 0.4626 MSMLGLRDLVLIAPTPSLHQQHQGQPISQDHNSNLPLPSSTALSVGFGIFPLLTATPCMPQTQNNEVQECNNNTNNTNNNNSSINYWNLKMCPEVNPPKKGVINVDDESHNKLMMESEENGVYGADFRVCQDCGNRAKKDCLYRRCRTCCKGRGYDCNTHVKSTWVPSIRRREREMAVVSAAGGGDGAKRPRPLVGSSHNATATSHSSNSNATTCHQDAGFKESLPGHVRAPAVFRCHRVTAIGNGEDEFAYMATVHISGHVFKGFLYDYGVDGKNAMPCVSELQLGNGRNGECSSAIGVPTTNAYPASAS. 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g07424 311 MobiDBLite consensus disorder prediction 180 213 - -
Seca4g07424 311 NCBIfam putative zinc finger domain, LRP1 type 129 171 IPR006510 -
Seca4g07424 311 Pfam Domain of unknown function (DUF702) 129 273 - -
Seca4g07424 311 MobiDBLite consensus disorder prediction 197 213 - -
Seca4g07424 311 NCBIfam LRP1 C-terminal domain 225 272 IPR006511 -
Seca4g07424 311 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 48 297 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g07424 Seca-Chr4 166619426 166620707 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Seca4g07424 DUF702 4.3e-54 No_clan