Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06847 ATGTGCAGCTCCAAGGCTAAAGTCACTCTAGGCATAGAAGCCTCCACCACCACTACCATACCACCAGTGGCCAGAATCAATGGAAGGTCAGTCCTTCAACCAACTTGCAACCGTGTTCCAAATCTTGAAAGGAGAAATTCAATTAAGAAAGTGATGACACCAAAGTCACTTTCTCCACCATCACCACCACTTCCAACCAAGACTTCATTGACACCTCCAGTTTCTCCAAAGTCTAAGTCTCCTAGGCCTCCAGCTATAAAGAGAGGAAATGACAATAATGGACTTAATTCAAGTTCTGAAAAGATTGTAATCCCAAGAAGCTCCATAAAAACTCCAACTTTAGAGAGAAAAAAGTCCAAGAGTTTTAAGGAAGGGTCTTCCTGTGGTTCTATAGAGGCATCATTGAGTTACTCTTCCTCTTTGATCACTGACTCCCCAGGGAGCATAGCTGCTGTGAGGAGGGAACAGATGGCTCTGCAGCAGGCACAGAGAAAAATGAAGATTGCCCATTATGGAAGATCAAAGTCTGCAAAGTTTGAAAGAGTTGTTCCTATTGATCCTTCAAACACTCTCACACCAAAGACATCTGAAGAGGAGAAGAGATGCAGCTTCATCACAGCCAATTCAGATCCCATCTATATTGCTTATCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAAGATGTTATTTGAACTTCTAGTTTTAAGCGGTGCTCAAGTTGGATCTGATTGGACCTCAACCTTGAAGAAACGCCTAGATTTCAGGGCTGCATTTTCAGAATTTGATGCAGAAACTGTGGCCAACTTGACTGATAAGCAAATGATGTCTATCAGTTCTGAATATGGCATTGATATAAGCAAAGTTAGAGGAGTTGTTGATAATGCTAACCAAATTTTACAGGTTAAAAAAGACTTTGGTTCATTTGACAAGTACATTTGGGGGTTTGTGAATCATAAACCTATCTCCACTCAATACAAGTTTGGGCACAAGATCCCAGTGAAGACATCAAAATCAGAGAGCATAAGCAAAGACATGGTTAGAAGAGGGTTTAGGTTTGTTGGGCCAACAGTGGTTCATTCATTTATGCAGGCAGCTGGTCTCACCAATGACCACTTAATCACTTGCCACAGGCACTTGCAATGCACCTTATTGGCATCATCTCGCCCCCATTGTACCATAGAGCCTTCTCTATAG 1200 0.42 MCSSKAKVTLGIEASTTTTIPPVARINGRSVLQPTCNRVPNLERRNSIKKVMTPKSLSPPSPPLPTKTSLTPPVSPKSKSPRPPAIKRGNDNNGLNSSSEKIVIPRSSIKTPTLERKKSKSFKEGSSCGSIEASLSYSSSLITDSPGSIAAVRREQMALQQAQRKMKIAHYGRSKSAKFERVVPIDPSNTLTPKTSEEEKRCSFITANSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSTLKKRLDFRAAFSEFDAETVANLTDKQMMSISSEYGIDISKVRGVVDNANQILQVKKDFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLTNDHLITCHRHLQCTLLASSRPHCTIEPSL. 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06847 399 Pfam Methyladenine glycosylase 207 380 IPR005019 GO:0006284|GO:0008725
Seca4g06847 399 MobiDBLite consensus disorder prediction 56 80 - -
Seca4g06847 399 PANTHER OS04G0501200 PROTEIN 23 388 - -
Seca4g06847 399 SUPERFAMILY DNA-glycosylase 200 383 IPR011257 GO:0003824|GO:0006281
Seca4g06847 399 Gene3D Hypothetical protein; domain 2 199 381 - -
Seca4g06847 399 MobiDBLite consensus disorder prediction 90 106 - -
Seca4g06847 399 MobiDBLite consensus disorder prediction 38 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06847 Seca-Chr4 143219167 143221954 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06847 4 143219167 143221954 Seca4g06847 4 143219167 143221954 ECH
Seca4g06847 4 143219167 143221954 Seca4g06847 4 143219167 143221954 PCT