Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g06514 ATGGCAGAGATTGTCCCTGCAGAGCCCATTGATGACATTTATTTTGAGCAAGGAGAGACATCTACAGCGAGAACCCATGCCACCTTGGCCATTACAAATGACAGTGATAGCAACGTTGATTATGTTCCAAGACCCTTTGACAGTGAAAGGTTGCCATCCGTTTTCGCTTCCGAAATTCAAAGGTTCCTTCGTGTGGCCAACTTGGTTGGAAGAGAGGAGCCTCGTGTTGCATATCTCTGCCGCGTTCACGCCTTTGTAATTGCACACAACTTGGACAAAAATTCTAGTGGAAGGGGTGTTAGACAATTCAAAACTGCACTCCTTCATCGACTTGAACAGGATGAGCATGTTACAAAAGTGGAGGGAAAGAGTGATATTAGAGAACTTAAGCGTGTTTACCATGCCTACAGAGATTATTTTATTAGACATGATAAAGCATTTGATTTAGAACAAAGTCGCCGAGAGAAATTGATAAATGCACGGAATATTGCTTCTGTTCTTTTTGAGGTCCTAAAAACAGTTACAGATACAGCTAGTACTCAGGCACTTATTGAAGGAAATGCAATCCACAAAAAAACTGAGTATAACATTCTTCCACTTGAGCAAGGAGGCATTAAGCATGCAATCATGCAGCAGCCTGAGATTAAGGCTGCCATTGCAGTTATTCGCAATGTTCGTGCTTTACCCCCAGCCCAAGATTTCAAGAAACATGGAGCCTTTGTAGATCTGTTTGACTTTCTTCAGCATTGTTTTGGATTCCAGGAAGCCAATGTGGCAAACCAAAGGGAACATCTGATTCTACTCCTAGCCAACATGCAGACTCGACAAACTCACAACCAGACAAATGTTTTGAAGTTAGCTGAAGGAGGTGTGGATGAATTGATGAGAAAGTTCTTCAAAAATTATACAAACTGGTGCAAGTTTTTAGGAAGAAAAAGTAATATCCGCTTACCTTTCGTGAAACAGGAAGCCCAACAATACAAAATTTTGTACATTGGGCTTTACCTGCTCATATGGGGGGAGGCAGCTAATTTGCGGTTTATGCCAGAATGTCTCTGCTATATCTTTCACCACATGGCATATGAATTGCATGGAATTTTAAGTGGTGCTATCAGCTTAACAACATGGGAAAAGGTCATGCCTGCATATGGAGGAGAACCAGAGTCTTTCCTTAATAATGTTGTCACCCCCATATACAAAGTTATAAAAGAGGAAGTTGACAATAGCAAAGGTGGGATAGCTGACCATTCTGCATGGAGAAACTATGATGATCTGAATGAGTATTTCTGGTCTCCTGATTGTTTCACAATTGGCTGGCCCATGTGTCAGGCCCATGATTTTTTCTTTGTACGATCTACAAATAAGCCTAATGTCAAGAATGCTCTTGTTGTATCACCTGGTAAAAGAAAAGAAAAGAAAAAGAGAGAAAAGAAGGATGAAGAATCTGAGCCAGAGGATACAGGGGAGGAAATCCATGAACCACAATGGCTGGGAAAGACAAATTTTGTAGAGATTCGTTCATTTTGGCAAATTTTTCGAAGCTTTGATAGAATGTGGAGTTTTTTTATTTTATCCCTTCAGGCCATAATAATCATTGCTTGCCATGACTTGGGATCTCCGCTTCAGTTGTTTGATGCCATAGTATTTGAGGACTTAATCAGCATCTTTATTACCTCTGCAATTCTTAAACTTATTCAAGCAATTTTAGACATCGCCTATACATGGAAAGCCAGACATACCATGGAACATTCTCAAAAAGTGAAACTTGTGATGAAGCTGCTCTTTGCCATTATATGGACTATTATTCTTCCTGTGTGCTATGCTAACTCAAGAAGAAAGTACACTTGTTATTCTACGAAGTATGGAAGCTTGGTTGAGGAATGGTGCTTTACTTCCTATATGGTTGCTGCTGCAATATACTTGACAACTAATGCAGTTGAAATTGTGTTATTTTTTGTCCCTGCTGTTGCCAAGTATATTGAGGTCTCTAATTACCAGATATGCAGAGTTTTGTCTTGGTGGATTCAACCTAGAATCTATGTTGGACGGGGGATGCAAGAAGACCAGGTTTCAGTTTTAAAGTACACCTTGTTTTGGTTACTGGTGTTATCAAGTAAATTTCTGTTCAGCTACTGTTTTGAGATAAAACCACTCATAGCACCAACTAGACAGATTATGAAAATTGGTGTAAAAAAGTATGATTGGCATGAGCTTTTTCCAAGAGTCAAAAGCAATGCTGGTGCAATTGTGGCTGTATGGAGCCCTGTAGTAATTGTATATTTTATGGACACACAAATTTGGTATTCTGTTTTCTGTACAATAATTGGTGGACTTTATGGCATTTTGCATCACCTTGGTGAGATAAGGACACTTGGAATGCTGAGAAGTAGATTTGATTCCTTGCCTTCAGCATTTAATGTCTGTCTGAACCCACCATCTTCCAAACGTGGTAAAAAGAAAAGAAAAGGTCTCCTCAGCAATATATTTCAAAAGATGCCTGATGAAAAAAATGCTGTTGCTAAATTTGTGGTAGTATGGAATCAAATTATAAACCATTTACGTCTTGAAGACTTGATTAGTAACAGAGAGATGGATTTAATGATGATACCCGTGTCTTCAGAATTGTTTTCTCGCAAGGTTCGGGTTCTTTGGCCTGTTTTCCTCTTGGCAAATAAGTTTTATACAGCTTTGACGATTGCTAAAGATTTTGAGGGAAAGGATGAAATTCTTGTCAGAAAAATTATAAAAGACAAATACATGTTTTATGCTGTAAGAGAATGCTACCAGTCACTGAAATACATCCTTGAGATTCTCATTGTGGGTAGCCAGGAGAAAAGGATCATATGTCATATACTGAGTGAAATTGAAAAAAGCATCGAAGAAAGAAGTCTTCTTAAGAACTTCAACCTGAAAGTTCTCCCAGCTTTACATGCTAAGGTCATCGAGCTAGCTGAACTTCTGATTGAGGGAGATAAAGACCATAGGCCCAAAGTTGTGAAAGCTTTACTTGATCTGTTTGAACTGGTAACAAATGATATGATGGCTGATTCCAGAATATTGGATACATTCCACTTTCCCCAACAAAATGAGTGTGGCTTTGTCTATTTTAGAAATGATCATCAACTATTTGCCAGTGAATTCTATCCATTTGCCAATGAGGATTCTATTCATTTTCCCTTGCCAGAAAGCGGCCCTTGGGTGGAAAAGATCAAGCGTTTCCATTTGTTGCTTACTGTCAAAGATACAGCAATGGACATGCCTGCAAACTTAGATGCTCGCAGGCGCATATCATTCTTTGCTACTTCTCTGTTTACAGATATGCCAGATGCTCCAAAAGTGCATAATATGCTGTCATTTAGTGTTATAACTCCACACTACATGGAGGACATTAATTTTTCGCTGAAGGAGCTTGGTTCAGATATAGAGGAGGACTCCATCATCTTTTACATGCAAAAGATATATCCAGATGAATGGACAAACTTTTTGGAACGTATGGGTTGTGAAAACCGTATGAGTTTAGAAGATGAACACAAGACAGAAGAGCTTAGACAGTGGGCTTCATTCCGGGGCCAGACACTAAGCAGAACTGTTAGAGGGATGATGTACTACAGAGAAGCCTTAAAATTGCAAGCATTTCTTGACATGGCTGAAGATGAAGATATTCTTGAAGGTTATGAGACTGCTGAAAGAGGTAACCGTGCATTATTTGCTCGTCTAGAAGCACTAACAGACATGAAATACACCTATGTCATTTCCTGTCAATCATTTGCATTACAAAAGGCTTTGAATGATCCCCGTTATAAGGATACAATCGACTTAATGATAAGGTATCCATCTCTTCGTGTTGCTTATGTTGAGGAAAAAGAGGAGATAGTACAGGGTAAAACTCACAAAGTATATTCGTCTAAACTGGTTAAAGTTGTCAATGGTTTTGAACAGACAATATATCAAATAAAACTTCCAGGCCCACCATATCTTGGAGAAGGGAAGCCGGAAAATCAAAACAATGCAATAATATTCACTCGTGGTGAAGCCCTCCAAACAATTGATATGAACCAAGTCGGCTTAGTTTCTGTTTACTCTCTTAATTTTTTTACAAATTATTTTCTATCATTGTATACAAAACTTGAAACTTGA 4137 0.3877 MAEIVPAEPIDDIYFEQGETSTARTHATLAITNDSDSNVDYVPRPFDSERLPSVFASEIQRFLRVANLVGREEPRVAYLCRVHAFVIAHNLDKNSSGRGVRQFKTALLHRLEQDEHVTKVEGKSDIRELKRVYHAYRDYFIRHDKAFDLEQSRREKLINARNIASVLFEVLKTVTDTASTQALIEGNAIHKKTEYNILPLEQGGIKHAIMQQPEIKAAIAVIRNVRALPPAQDFKKHGAFVDLFDFLQHCFGFQEANVANQREHLILLLANMQTRQTHNQTNVLKLAEGGVDELMRKFFKNYTNWCKFLGRKSNIRLPFVKQEAQQYKILYIGLYLLIWGEAANLRFMPECLCYIFHHMAYELHGILSGAISLTTWEKVMPAYGGEPESFLNNVVTPIYKVIKEEVDNSKGGIADHSAWRNYDDLNEYFWSPDCFTIGWPMCQAHDFFFVRSTNKPNVKNALVVSPGKRKEKKKREKKDEESEPEDTGEEIHEPQWLGKTNFVEIRSFWQIFRSFDRMWSFFILSLQAIIIIACHDLGSPLQLFDAIVFEDLISIFITSAILKLIQAILDIAYTWKARHTMEHSQKVKLVMKLLFAIIWTIILPVCYANSRRKYTCYSTKYGSLVEEWCFTSYMVAAAIYLTTNAVEIVLFFVPAVAKYIEVSNYQICRVLSWWIQPRIYVGRGMQEDQVSVLKYTLFWLLVLSSKFLFSYCFEIKPLIAPTRQIMKIGVKKYDWHELFPRVKSNAGAIVAVWSPVVIVYFMDTQIWYSVFCTIIGGLYGILHHLGEIRTLGMLRSRFDSLPSAFNVCLNPPSSKRGKKKRKGLLSNIFQKMPDEKNAVAKFVVVWNQIINHLRLEDLISNREMDLMMIPVSSELFSRKVRVLWPVFLLANKFYTALTIAKDFEGKDEILVRKIIKDKYMFYAVRECYQSLKYILEILIVGSQEKRIICHILSEIEKSIEERSLLKNFNLKVLPALHAKVIELAELLIEGDKDHRPKVVKALLDLFELVTNDMMADSRILDTFHFPQQNECGFVYFRNDHQLFASEFYPFANEDSIHFPLPESGPWVEKIKRFHLLLTVKDTAMDMPANLDARRRISFFATSLFTDMPDAPKVHNMLSFSVITPHYMEDINFSLKELGSDIEEDSIIFYMQKIYPDEWTNFLERMGCENRMSLEDEHKTEELRQWASFRGQTLSRTVRGMMYYREALKLQAFLDMAEDEDILEGYETAERGNRALFARLEALTDMKYTYVISCQSFALQKALNDPRYKDTIDLMIRYPSLRVAYVEEKEEIVQGKTHKVYSSKLVKVVNGFEQTIYQIKLPGPPYLGEGKPENQNNAIIFTRGEALQTIDMNQVGLVSVYSLNFFTNYFLSLYTKLET. 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g06514 1378 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 177 1353 - -
Seca4g06514 1378 SMART FKS1_dom1_2 326 442 IPR026899 -
Seca4g06514 1378 MobiDBLite consensus disorder prediction 465 491 - -
Seca4g06514 1378 Gene3D - 45 202 IPR023175 -
Seca4g06514 1378 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 328 439 IPR026899 -
Seca4g06514 1378 Pfam Vta1 like 58 194 IPR039431 -
Seca4g06514 1378 Pfam 1,3-beta-glucan synthase component 1175 1353 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Seca4g06514 1378 MobiDBLite consensus disorder prediction 465 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g06514 Seca-Chr4 131365711 131384729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g06514 3 1353 Glycosyltransferase AT3G14570 62.843 0.0 1746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g06514 4 131365711 131384729 Seca4g06514 4 131365711 131384729 ECH