Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g05905 ATGAAACTTTTTGGGTTGACAAAGGCTAGCTTTTGCATTGTTTTGGTTCTTAATATTGTGGCAGCCGTCAGCATTGAAGAAAAGAAGGAAACACAAGAATTCCTTAACCAGCTATTTGATCCTGCATCTGGAGTGTTAGATGATGACACGGCAGAGGTACTATGGATCACTTGTTGGGAAGATTTGATTCATTTAAAGAATGAAGTAGGAGATCTTGACTTATGCCTCCCAAAGGAATCACCCAGTAGCACCAATGAAATTAGTTCAGAAAGTGGATCAGTAACAAGAGAAAACATCCAAAATTTGATTAATGCATGCCATCCTCAGTTGAAGGAAAAATTTCTTCACTGTTTGAGGAAAAATAATTTTCCCTTCCATGTGTCTCAAGAAGAGGATGAGTCAAAGATTTGGCATGCCCCTTATATGGGATCACTTTCGTCCAGAAGACATCTGGGTCATGTTTTGCCTCAGCGCATATCAGAATCAGAAAAACTAGACAAAGAAGAAGATGAGGAAGATGACTCACCTAAAAAATCCAGTTCTAAAGATCGTGACCCAGATAAACCACCAAAAAAAAAATCCAAGTCTTCTAAGGGTAGTAAGCAAAAAGACACAGTTTATCAAGCCGTAGCTATAACTGCATTGTTGACATTTGTAGGTGCAGCACTGATCTTTTTATGCTGTTGTCGTTGTTGTGGAAGTGGCCGAGTGAGACAAAATGATGAGAGGCCCCTTCTCAGTATGAGCATGAATGACTACTCTGTTGGTACATATATAAGTTCTTCTTCCAATAATAACCCATTAAAAGAGGAGAAAGATGGGTTTCAGTCATCATTTAACACTGTGGTTGATGACAAGAAGAACTCAGTGCAGGAAAGTCAAGCAGCAGGAGTTGCTAGTGCTGCTGCAAGACCATCATTTGAACTGAAACCTCCTCCTGGGAGGGTAGGGACAGGAATGCCTCCTTTGAAACCTCCTCCTGGCAGGCTTGATCTTCTTCCACCTGAACCACCTTCAATAAAGCCTTCTGATAATGCCACTGCTCCTCCTCCTCCTCCTCTCCCCCCTGCTCGTCCTCCTCCTCCTCCTCCTGGTCCTGCTCCTCCTCCTCCTCCTCCCCCTGCTCGTGCTCCTCCTGCACCCCCACGGCCTGGCAGTGGTGGCCCGCGGCCTCCTCCACCACCTCCTAAGGGTGGTAAAGGTCCTCCACCACCACCTAGGGGTGGTATAGGTCCTCCACGAGCTCCTCCTCCAATTGGCCCAAAGATAGCTAGACCTGCATCTCGTGGACCAAAGGCTCAAGAGAATGCTGAAGCTAGTTCAGAAGGTGAAGCTAATGCTCCTAAGACCAAGTTAAAGCCCTTTTTCTGGGATAAGGTTCAAGCCAATTCAGATCAATCGATGGTTTGGAGTCAGATCAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAAACGCTTTTTGGCTATACTGCTCCGCCTGCAGATAAACTCAAAGGCATGCAAAAGAAAGAGTCCTCTTCCCAGGATCCTTCACCTCAGTTTATCCAGATCGTTGAATCAAAGAAAGCACAAAATTTATCAATTCTGTTGAAAGCATTGAATGTGACACTGGAAGAAGTTTGTGATGCACTTCTTGAAGGAAATGAGCTCCCCACAGAATTCCTTTACACCCTGCTGAAGATGGCACCAACTTCAGAGGAAGAACTTAAGCTTAGACTTTTCAACGGTCACCTTTCCAAGCTTGGGCCTGCTGATCGATTCCTGAAAGCCTTGGTTGAGATTCCATTTGCTTTTAAAAGAATGGAAGCATTGCTTTACATGGGTACTCTTCAAGAGGAACTCACTACTACCCGGGATGCTTTTGCAATTTTGGAGGTTGCCTGTAGGGAACTAAGAAGCAGCCGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTCAAAACTGGAAACCGAATGAATGATGGGACATTCCGTGGTGGTGCACTAGCATTTAAACTTGATACACTACTGAAACTGTCTGATGTAAAAGGAGTAGATGGCAAGACTACTCTCTTACTCTTTGTTGTTCAAGAGATAATCCGCACTGAGGGCATAAGAGCTGCTCGTATGGCAAAAGAGAGCCGTAGTTTCTCTAGTATAAAAACTGATGACCTTCTTGAGGATGTTGCTCAGGAATCAGAAGAACACTATCGTGAACTTGGTCTTCAGGTGGTTTCACGTCTGAGCAGTGAACTTGAGAATGTGAAGAAAGCAGCAGCTCTAGATGCTGATGGCTTAACAGGAACAACTGCTAGACTAGGCCATGGTCTCATAAAAACAAGAGACTTTGTAGACAAAGAGATGAATAACACAGAGGACGATAAAGGGTTTCTTGAGACGGTTAAGAGTTTTGTGGAGAAAGCTGAGGTTGATGTCACGAAACTGCTGGAAGAAGAGAAGAAAATCATGGCTTTAGTGAAGAACACTGGTGATTACTTTCATGGGAATTCTGCGAGGGATGAAGGCTTAAGATTGTTTATGATAGTACGTGACTTCTTAGTAATGTTGGATAAGGTATGCAAGGAGATTCAAAAAGCACCAAAGAAGCCAACACCAGCAACAAAAACTGTGAAACAAGATACTCCTAGTTCTAGAGGGTCATCTTCCTCTGAAACTCGTCCTCCACCTCCTCCTGATATTCGCCAGCGGCTTTTTCCAGCAGTGGCAGATAGGAGGGTTGATGACTTTAGTTCAGATGATGAGAGTCCATAG 2754 0.4408 MKLFGLTKASFCIVLVLNIVAAVSIEEKKETQEFLNQLFDPASGVLDDDTAEVLWITCWEDLIHLKNEVGDLDLCLPKESPSSTNEISSESGSVTRENIQNLINACHPQLKEKFLHCLRKNNFPFHVSQEEDESKIWHAPYMGSLSSRRHLGHVLPQRISESEKLDKEEDEEDDSPKKSSSKDRDPDKPPKKKSKSSKGSKQKDTVYQAVAITALLTFVGAALIFLCCCRCCGSGRVRQNDERPLLSMSMNDYSVGTYISSSSNNNPLKEEKDGFQSSFNTVVDDKKNSVQESQAAGVASAAARPSFELKPPPGRVGTGMPPLKPPPGRLDLLPPEPPSIKPSDNATAPPPPPLPPARPPPPPPGPAPPPPPPPARAPPAPPRPGSGGPRPPPPPPKGGKGPPPPPRGGIGPPRAPPPIGPKIARPASRGPKAQENAEASSEGEANAPKTKLKPFFWDKVQANSDQSMVWSQIKAGSFQFNEEMMETLFGYTAPPADKLKGMQKKESSSQDPSPQFIQIVESKKAQNLSILLKALNVTLEEVCDALLEGNELPTEFLYTLLKMAPTSEEELKLRLFNGHLSKLGPADRFLKALVEIPFAFKRMEALLYMGTLQEELTTTRDAFAILEVACRELRSSRLFLKLLEAVLKTGNRMNDGTFRGGALAFKLDTLLKLSDVKGVDGKTTLLLFVVQEIIRTEGIRAARMAKESRSFSSIKTDDLLEDVAQESEEHYRELGLQVVSRLSSELENVKKAAALDADGLTGTTARLGHGLIKTRDFVDKEMNNTEDDKGFLETVKSFVEKAEVDVTKLLEEEKKIMALVKNTGDYFHGNSARDEGLRLFMIVRDFLVMLDKVCKEIQKAPKKPTPATKTVKQDTPSSRGSSSSETRPPPPPDIRQRLFPAVADRRVDDFSSDDESP. 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g05905 917 MobiDBLite consensus disorder prediction 159 203 - -
Seca4g05905 917 PANTHER FORMIN-RELATED 379 906 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Seca4g05905 917 SMART it6_source 442 865 IPR015425 -
Seca4g05905 917 MobiDBLite consensus disorder prediction 159 193 - -
Seca4g05905 917 Gene3D Formin, FH2 domain 447 882 IPR042201 -
Seca4g05905 917 MobiDBLite consensus disorder prediction 315 424 - -
Seca4g05905 917 ProSiteProfiles Formin homology-2 (FH2) domain profile. 442 876 IPR015425 -
Seca4g05905 917 MobiDBLite consensus disorder prediction 868 884 - -
Seca4g05905 917 MobiDBLite consensus disorder prediction 899 917 - -
Seca4g05905 917 SUPERFAMILY Formin homology 2 domain (FH2 domain) 391 863 - -
Seca4g05905 917 MobiDBLite consensus disorder prediction 288 450 - -
Seca4g05905 917 Pfam Formin Homology 2 Domain 444 850 IPR015425 -
Seca4g05905 917 MobiDBLite consensus disorder prediction 859 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g05905 Seca-Chr4 113479225 113485001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g05905 419 908 FH2 protein (formin) Gene Family AT5G54650 65.244 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g05905 - - gmx:100792872 740.725