Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03370 ATGGAGGAACATAAATCTGTGATCCCTTCCTGTGAAGAAGATCAACATGTGGTTGCTGCTGCTCAGCACATTTTAAAGGCTCTAGCTGCAAGTAAGACAGTCTCTGATGACTTGAGAAAAAATCTCTTGGATCTTGAGATCCAGTTGTCTGCAATGTCCATAGTCAGTGAAAGAAATGGAAGGGGCATCAAGCAATTAGAGAGACAACTTAAATGTGCTGAAGACAAGGTAATGAGTTGGGAGGCCAATCACTCCATGATATGGGACTCTAGTCCCAGAGAGTCTTCTGAGTTTTTAAAAGTTGTTGGGGAAATCCAAACACTGACTCAAAGTTTGCAAAACTGTTCTGTGAATGAAAATAGGAAGCAGAAGGAACTTCTTCAACGAGCTAATGGAATTCTGCAAATTGCTATGTCAAGGCTTGAGGAAGAGTTGGTTAACATTCTTGTTCAGCATAAGCAATACTTTGAGCCTGAATACATGTCTTTCCATTTTAATAGAGTGGATATGGTGTATGATGAGTCATTTGGTTCAGTTGAGGATGAACAAATAGAGGAGGCATCCCGGAGTAGCGGTGTTAGCCAGTCTGAGGCCAGCACTGTAGATTTGGTGAATCCAGCTATACTTGAGGATCTCAAGAGAATTGCTAATGTCATGTTTGCTTCAAAATACCATCAGGAATTCTGTCAGGTCTTCATTTCTTCCAGGAGAGGTGCCTTGGATGAGTACTTTTTCATTCTTGAAATGGAAAAATTAAGCATTGAGAATGTGCTGAAAATGGAGTGGAATTGCTTGAACCATGAGATAAAGAAATGGATTCGGGCTATGAAGATCATTGTTCCTGTGTATCTTCTCAGTGAGAAAAGATTATGTAAGCAGATTCTTGGAGACTTTGGATCTGTTTATCAATTTTGTTTCTCTGAAATATCTCAGAGTTTTATGTTGGAACTTCTAAATTTTGGAGAGGCCATAGCAATGGGAACACATCCACCAGAAAGATTGTTTCGTTTACTTGACATGTATGAGGTTTTGGAGCATCTTGCTGTGGATGTTGATATTTTGTTCTTTGAAGAAGTTGGTTCTTTTGTTAGGGGAGAGTTTTACAAACTTCTGAAGAGGTTTGGTGATACCATAAAGTCTACATTTCTGGCATTCAGAAACGCTATTGCAGCTGATCCATCAAAAACAAGTTTTCCTGGAGGGGGAGTTCACCATCTCACCAAGTATGTCATGAATTACATCAGGGCACTTGTTGAGTATGGTGATACCCTTAATCTTCTTTTAGAAGAAAATCCAACTGATGCATCAAACAATGACAACAAGCATGACAATTCAGCTCTCTCAGTTTGCACAATGGCTTGCCACTTTCGGTTAATCACTGCCACTCTAGAAACCAACTTGAGAAACAAATCCAAATTATACAAAGATGTGGCTTTGCAACATATTTTCATGATGAACAACATTCATTACATAGTGCAAAAGGTTAAGTGTTGTGACTTAAGCCATTTCTTTGGAGACTCCTGGCTTCGCCACCATGTTGGGAAGTTTCAGCAAGATGCTAGAAGTTATGAGAAGGTAACTTGGGGTTCAGTCCTTTCTATGCTTAGGGAGGATAATGTGCCAAATTGTATTTCAGAGAGAACTCTAAAGAAAAGGTGCAAAGAGTTTAGTACTGCTTTTGGTGAAGTATACAGGAGCCAGACAGGGTGGTGTATACCAAACTCTGAACTTCGTGAAGATCTACAAATTTCAGTTTCTCAGAAAGTAGTTCCTGCTTACCGCTCATATACTGGGAGAAACTCATCTAACATTGCTGAGAAGTGGATCAAGTACACTGTAGATGATCTGCAAAGTTATATTTTGGATCTTTTTCAAGGTTCATCAAAATCTTTGCCCCATGCTCAGCAAAAAAAGTGA 1917 0.3944 MEEHKSVIPSCEEDQHVVAAAQHILKALAASKTVSDDLRKNLLDLEIQLSAMSIVSERNGRGIKQLERQLKCAEDKVMSWEANHSMIWDSSPRESSEFLKVVGEIQTLTQSLQNCSVNENRKQKELLQRANGILQIAMSRLEEELVNILVQHKQYFEPEYMSFHFNRVDMVYDESFGSVEDEQIEEASRSSGVSQSEASTVDLVNPAILEDLKRIANVMFASKYHQEFCQVFISSRRGALDEYFFILEMEKLSIENVLKMEWNCLNHEIKKWIRAMKIIVPVYLLSEKRLCKQILGDFGSVYQFCFSEISQSFMLELLNFGEAIAMGTHPPERLFRLLDMYEVLEHLAVDVDILFFEEVGSFVRGEFYKLLKRFGDTIKSTFLAFRNAIAADPSKTSFPGGGVHHLTKYVMNYIRALVEYGDTLNLLLEENPTDASNNDNKHDNSALSVCTMACHFRLITATLETNLRNKSKLYKDVALQHIFMMNNIHYIVQKVKCCDLSHFFGDSWLRHHVGKFQQDARSYEKVTWGSVLSMLREDNVPNCISERTLKKRCKEFSTAFGEVYRSQTGWCIPNSELREDLQISVSQKVVPAYRSYTGRNSSNIAEKWIKYTVDDLQSYILDLFQGSSKSLPHAQQKK. 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03370 638 Coils Coil 124 144 - -
Seca4g03370 638 Pfam Exo70 exocyst complex subunit 270 621 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca4g03370 638 SUPERFAMILY Cullin repeat-like 86 624 IPR016159 -
Seca4g03370 638 Gene3D Exocyst complex component Exo70 78 633 - -
Seca4g03370 638 PANTHER EXOCYST COMPLEX PROTEIN EXO70 62 626 IPR004140 GO:0000145|GO:0006887
Seca4g03370 638 Coils Coil 63 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03370 Seca-Chr4 58328668 58330584 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03370 4 58328668 58330584 Seca4g03370 4 58328668 58330584 ECH