Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g03274 ATGACTATAACAAAAGCAATAAAAGCGAAAACTGTGAGAACGAATGCATATTTCAGGCATACAGGTTTGAATGCCGATGCCTCTGATTCTGTTGAGTTGCAAAAGGATAAACTACTTGGTGGCCTTCTAGCAGCTGTGAAAGATCTCAGGTCTGGTCATTTAAGTGAGTCTTCAGCTTGTAAATATGTAGTTTGGATTTCATGTAGTGGGTTAGGGAACAGGATATTGACCTTAGCTTCTGCATTTCTTTATGCTCTCCACACAAACCGTGTTCTCTTGGTTGATCCTGGAGTTGATATGATTGATCTCTTTTGTGAAACGTTTCCAGATGTTTCTTGGTTTCTCCCTCCTGATTTCCCCCTTAACAGTCAATTTCATAGTTTCAATCAGAAATCTGCTCAATGTCATGGGACAATGCTGAAAAGTAAATCAATTACAAATTCCATGGTGCCTTCTTTGTCTACCTTCATCTTGCTCATGACTATGATGATCATGATAAGCTTTTCTTCTGTGATGAAGACCAACATTTTCTCCAGAAAGTACCTTTGCCAATGGTGA 558 0.3907 MTITKAIKAKTVRTNAYFRHTGLNADASDSVELQKDKLLGGLLAAVKDLRSGHLSESSACKYVVWISCSGLGNRILTLASAFLYALHTNRVLLVDPGVDMIDLFCETFPDVSWFLPPDFPLNSQFHSFNQKSAQCHGTMLKSKSITNSMVPSLSTFILLMTMMIMISFSSVMKTNIFSRKYLCQW. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g03274 185 PANTHER FUCOSYLTRANSFERASE 2-RELATED 45 153 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca4g03274 185 Gene3D - 57 111 - -
Seca4g03274 185 FunFam Galactoside 2-alpha-L-fucosyltransferase 58 109 - -
Seca4g03274 185 Pfam Xyloglucan fucosyltransferase 45 152 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g03274 Seca-Chr4 56461302 56462182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g03274 46 158 Xyloglucan Fucosyltransferase1 AT2G03210 57.522 4.47e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g03274 K13681 - gmx:100800258 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g03274 4 56461302 56462182 Seca4g03274 4 56461302 56462182 ECH