Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g02360 ATGAATAGGCAGCGATTACAACTACTTGGTGTTGCCTGCATGATGATTGCTGCCAAATACGAGGAGATCTGTGCCCCTAAGGTGGAAGAGTTCTGTTACGTAACTGATAATACATATTCTAGGGAGCAGGTATTGCAGATGGAATCTGCCGTGCTGAGTTTCTTGAAGTTTGAAATGACCGCTCCTACAACTAGATGTTTTTTAAGGCGCTTCATTATTGTTGCCCAACAAACCTGTGAGGTTCCATTGATGCAGTTGGAGTATTTGGCAGACTATCTCGCAGAGTTATCTCTTCTAGAGTATGGTATGCTCAAGTACACCCCGTCCATAATAGCTGCATCAGCCACTTTCTTGGCTATATACATACTACTTCCTAGGAAGAAACCTTGGAATTCTATGCTAAGACATTACACAGGTTACCAAGCATTTGAATTGCGTGGATGTGTCAAGGGATTGCACTGGTTGTACTGTTTTGGCTGTCATAATTTACCTGCCATCAGGGAGAAATACAGTCAGCATAAGGTGAGAATACCCTGGTCATGCTACTTGTGTATGTGTGGGGTAAAATTGGGTGACATAAAGCAGTCTACAATCACATTCCTTGGTTCTTGGCATTTTCTGCACCTTGTCTATGAACTTTGA 642 0.4252 MNRQRLQLLGVACMMIAAKYEEICAPKVEEFCYVTDNTYSREQVLQMESAVLSFLKFEMTAPTTRCFLRRFIIVAQQTCEVPLMQLEYLADYLAELSLLEYGMLKYTPSIIAASATFLAIYILLPRKKPWNSMLRHYTGYQAFELRGCVKGLHWLYCFGCHNLPAIREKYSQHKVRIPWSCYLCMCGVKLGDIKQSTITFLGSWHFLHLVYEL. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g02360 213 Gene3D - 2 60 - -
Seca4g02360 213 Gene3D - 61 175 - -
Seca4g02360 213 PANTHER CYCLINS 3 176 IPR039361 -
Seca4g02360 213 PIRSF Cyclin_A_B_D_E 1 177 IPR046965 GO:0016538|GO:0044772
Seca4g02360 213 FunFam Cyclin A1 49 177 - -
Seca4g02360 213 Pfam Cyclin, C-terminal domain 62 175 IPR004367 -
Seca4g02360 213 SMART Cyclin_C_2 62 182 IPR004367 -
Seca4g02360 213 Pfam Cyclin, N-terminal domain 2 59 IPR006671 -
Seca4g02360 213 SUPERFAMILY Cyclin-like 62 175 IPR036915 -
Seca4g02360 213 SUPERFAMILY Cyclin-like 2 59 IPR036915 -
Seca4g02360 213 SMART cyclin_7 66 154 IPR013763 -
Seca4g02360 213 SMART cyclin_7 1 53 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g02360 Seca-Chr4 40161673 40163354 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g02360 1 174 Core Cell Cycle Gene Families AT1G44110 69.318 5.40e-85 257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g02360 4 40161673 40163354 Seca4g02360 4 40161673 40163354 ECH
Seca4g02360 4 40161673 40163354 Seca4g01409 4 22693780 22696634 PCT