Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01547 ATGGGAGAGACAGAGTACCATCACCACCACCAACCACCACCACCGGCACCTCTGTCATCGCCTAACCTTGCACTTTCAAGGGGACCCATTTGGACTCCAACTGAACAACTCTATCACCTTCACTACTGCATCCACTCCAACCCTTCATGGCCACAAGCACTTCTACTGGGTTTTCAGCACTACATTGTGATGCTTGGAACAACAGTTTTAATCGCAACTACACTAGTGCCTCAAATGGGTGGTGATCATGGTGACAAAGCTCATGTGATTCAGTCATTGTTGTTTATGTCCGGAGTAAACACACTGCTTCAAACTTGGTTTGGATCAAGGCTTCCAACGGTGATGAGTGGATCATTTGCTTTTGTTCTTCCTGTGATGTCCATCATAAATGATTACACAGACCGGACATTTGCTTCAGAACATGAGAGGTTTACCTACACAATGAGAACAATACAAGGATCCTTGATTGTTTCTTCTTTCATCAACATCATCCTTGGATATAGTAAGTCATGGGGAAGTTTAACAAGATTATTTAGTCCAATAGTGATTGTACCTGTGGTATGCCTGGTGGGTCTTGGTCAATTCATGAGGGGTTTTCCACAGGTTGCAAATTGTGTGGAGATTGGATTGATTATGCTCATTCTACTTGTCATAACCCAACAGTATTTGAACCATATTCATCCTATTGCACATCATGTACTTGAGAGGTTTTCTTTACTTGTCTGCATTGCTATTATTTGGGCTTTTGCTGCTATCCTTACTGTGGCTGGTGCATACAATACTGCTAAACAAAGGACCCAAGTGAGTTGTTGCACAGATCGCTCATACCTCTTGTCTTCTGCTCCTTGGATTAAAATTCCATACCCATTTCAGTGGGGTACTCCCATATTCAGAGCTAGTCCTGTCTTTGGGATGATGGGGGCTGCACTTGTCACTTCTGCAGAGTCAACTGGGACATTCTTTGCAGCAGCCAGGCTCTGTGGTGCAACACCCCCTCCTGCACATGTGCTCAGCAGAAGCGTTGGGCTACAGGGTATTGGCATGTTGCTTGAAGGCATTTTTGGTGCTGTTGTTGGTACTACTGCATCTGTTGAAAATGTTGGCCTACTTGGTCTAACTCATATAGGGAGCAGAAGAGTAGTGCAGATATCGTGTGCTTTCATGATTTTCTTCTCCATATTTGGGAAATTTGGAGCCTTTTTTGCATCAATTCCCTTATCAATATTTGCAGCTATATACTGTGTTTTGTTTGGTATTGTGGCTGCTGTTGGGATCTCATTTATACAGTTTACCAATAACAACTCCATGAGAAATCTCTATGTTTTGGGCCTGTCCCTGTTTCTAGGGATCTCAATACCTCAATTTTTTATCATGAACACTGCCCCAGATGGTCATGGTCCAGTTAGAACAGATGGTGGATGGTTTAATGACATTTTGAACACCATATTTTCTTCTCCCCCAACTGTGGCAATAATTGTTGGAACACTTCTTGACAACACACTTGATGTCAAACATACAGCAAATGACAGAGGACTTCCATGGTGGGTTCCTTTCCAGAACAGGATGGGAGATGTTAAAAATGATGAGTTTTACATTCTTCCTCTCAGGTTAAATGAGTATATGTCCACCAGATTTCTCTAA 1641 0.4266 MGETEYHHHHQPPPPAPLSSPNLALSRGPIWTPTEQLYHLHYCIHSNPSWPQALLLGFQHYIVMLGTTVLIATTLVPQMGGDHGDKAHVIQSLLFMSGVNTLLQTWFGSRLPTVMSGSFAFVLPVMSIINDYTDRTFASEHERFTYTMRTIQGSLIVSSFINIILGYSKSWGSLTRLFSPIVIVPVVCLVGLGQFMRGFPQVANCVEIGLIMLILLVITQQYLNHIHPIAHHVLERFSLLVCIAIIWAFAAILTVAGAYNTAKQRTQVSCCTDRSYLLSSAPWIKIPYPFQWGTPIFRASPVFGMMGAALVTSAESTGTFFAAARLCGATPPPAHVLSRSVGLQGIGMLLEGIFGAVVGTTASVENVGLLGLTHIGSRRVVQISCAFMIFFSIFGKFGAFFASIPLSIFAAIYCVLFGIVAAVGISFIQFTNNNSMRNLYVLGLSLFLGISIPQFFIMNTAPDGHGPVRTDGGWFNDILNTIFSSPPTVAIIVGTLLDNTLDVKHTANDRGLPWWVPFQNRMGDVKNDEFYILPLRLNEYMSTRFL. 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01547 546 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 34 541 - -
Seca4g01547 546 Pfam Permease family 52 455 IPR006043 GO:0016020|GO:0022857|GO:0055085
Seca4g01547 546 NCBIfam purine/pyrimidine permease 54 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01547 Seca-Chr4 24988827 24993873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01547 33 540 Organic Solute Cotransporters AT2G34190 59.055 0.0 623
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01547 4 24988827 24993873 Seca4g01547 4 24988827 24993873 ECH