Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01519 ATGTTAACTGCTCCAAATGATCAACAACGTCCACTTTTTGCAGCCAAGGATATCAAGCCTTTTTACTTGGAACACAGCCCTAAGATTTTCCCACAACACAGGGACTTTTTGGGGATAAGAAAGTTTTTTAGATCATTAGTAGGACCAAAATACGATGGAAAATACCTGCATCAGGTCGTGAGGGAAAAGTTGGGAGAAATTCGTCTGCATGAAACGCTTACCAATATTGTGATTCCCACATTTGATTTAAAGACATTGCAACCAACGATTTTCTCTTCTTATAAGATAAAGAAATCTCCATGTTTGGATGCTCGACTCTCTGACATATGTATCAGTACCTCTGCTGCACCTACTTATCTTCCCGCTTACACCTTCAAGAATCAAGACTCTCATGGGAACGTTCATGAATTCAACCTCACTGACGGCGGCGTTTGTGCAAATAATCCCACCTTAGTGGCTGTGAGTGAAGTAACCAAGCAGATGATTAATGAAAATCCTGACTTCTTTCCCATCAAGCCTGTGGAATACAGTCGATTCTTGATAATATCATTGGGCACAGGGACACCTAAGAATGAACAAAAGTTCAATGCCAAAATGGCAGCCAAATGGGGTTTATTGGATTGGTTAACACATAGTGGTTCTACTCCCTTATTTGACGTGTTTAGTCAATCCAGTGCTGATATGGTTGATTACCATCTTTTTACAGTCACTCAAGCTTTTCATTCACAAGATAAGTACCTCCGTATACAGGATGATACGTTGACTGGTACGGAATCTTCGGTTGATATTGCCACAAAAGAGAATTTGGAAAAATTAGGCCAAATTGGTGAAAGGTTGTTGAAGAAACCAGTATCTAAAGTCAATTTAGAGTCTGGTCTATTTGAGCCAATACAAAATGGGGAGACTAATGAAGAAGCTCTCAGAAGGTAA 930 0.3978 MLTAPNDQQRPLFAAKDIKPFYLEHSPKIFPQHRDFLGIRKFFRSLVGPKYDGKYLHQVVREKLGEIRLHETLTNIVIPTFDLKTLQPTIFSSYKIKKSPCLDARLSDICISTSAAPTYLPAYTFKNQDSHGNVHEFNLTDGGVCANNPTLVAVSEVTKQMINENPDFFPIKPVEYSRFLIISLGTGTPKNEQKFNAKMAAKWGLLDWLTHSGSTPLFDVFSQSSADMVDYHLFTVTQAFHSQDKYLRIQDDTLTGTESSVDIATKENLEKLGQIGERLLKKPVSKVNLESGLFEPIQNGETNEEALRR. 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01519 309 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 1 154 IPR002641 GO:0006629
Seca4g01519 309 SUPERFAMILY FabD/lysophospholipase-like 1 290 IPR016035 -
Seca4g01519 309 FunFam Patatin 1 309 - -
Seca4g01519 309 Pfam Patatin-like phospholipase 49 153 IPR002641 GO:0006629
Seca4g01519 309 PANTHER XYLOSE ISOMERASE 1 309 - -
Seca4g01519 309 Gene3D Cytosolic phospholipase A2 catalytic domain 1 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01519 Seca-Chr4 24555270 24557716 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g01519 1 307 Miscellaneous Gene Families AT2G26560 62.013 1.90e-137 393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01519 4 24555270 24557716 Seca4g01519 4 24555270 24557716 ECH