Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01493 ATGCAAGCGGTGGGTAGGCTCGGAAGCTATATTAGTCAGGGCGTGTACACAGTTTCAGGGCCCTTTCATCCATTTGGTGGTGCCGTGGATATTGTGGTTGTTGAACAAGAAGATGGGAGCTTCAAGTCCTCACCTTGGTATGTCCGATTTGGCAAATTCCAAGGGGTTTTGAAGGCAAGGGAAAAGGTTGTTAACATTTGTGTCAATGGGGTGGAAGCTGATTTCAAAATGTATCTGGATCATAAAGGGGAAGCTTTCTTTCTCAGGGAATCCGATGCAGAATCCCTTTTGATGTATCCTCCATCACCATCTTCTGGCGATTCTCACTCTCTTAGGTCCAAAAGTTGTAACTTTGATTCAGAGAGTGGTGGTGAGATTGTGGGCAGGGATAGTTCTCGCCGTTCTAGAATACTTGGCCTTGTGTTTGGGAGAAGGTCTTTGAAGGAGAATGTTCAAGATGTGAATGGAAATAGGATAGATTCCATGGAGCGTGCTAAGATTGCAGCCAACCTGCTGGAACTCAAGTGGTCTGGTGAAGACAATCAAAAAATGGATGATGGCTTATTGCACCAAGGTGAATCAAATGGTGAAGGTTGTTTTGATATTGCAGAGGATGGTGGACATGACCTGAATGGGAAGGATGTGGAACTTGAAGGATGCATAGAAAAGCAATTGAATGGTAAAGAGGTTTCTGGTGTAAGCATTGTTGATGCACCTGGTAATGATGTTTCTGAGGAGGACATTGCAACTGATGGAGTTTGCTGTGAAGCATCAGAGAGTTCCAAAGTGGAACAAGCTCATGAGGTGCTGTACCTTGCTGATAGGCATGTCCATGATGAAGTCTTGCATGGTGCAACTGAACTGCTATCTGAGGGTACAGAAACTGAGGAAGTCACTAAGAATGCTGATCTTGGGATGTCAGTAATGGAAGTTTCTCAGTTACATGCTCAGGCTCAGAAGATGGATTGTTCTGATTCTGATGTTAGTATGTATGATGTGGCCGATGTTGAAGACCTAACAACATCACCAAGACCTCACACTGTCACTATGGATCTAGGACATTGTTCAAGTGAGAAAGTTGAGACAAATTGTGTTGCCAAACCTTACAGTTACAGCAGCCAGGATGACCAAGCCTTAGATGAGAATAATATGAAAGAAAAAGATGTCTCTAGCACATTATTGTCTCCTCTGGACTCACTTGGTGATTCTTTACCTAGAAAAGCATCAAGTAGATCACCATCACCATGTTCAGAGGATGAACATTTCCTTTTTAGTGACCTTGATGAAAACAGAATCAATGAACAATTTGAGGGATCATTCTCCCCTGAATATGTAGACAAAGAAGATCATCTTTCTGATGAGAATGGTACTGAAAAGTTAAGAGTAACATCCAGTCCCATAGTTATCCCTAGAAATGAGGATGCTGGGGAGGAAGATGGGCAGCACACAGGATCCTTGCCAAATATTTCTTCTGGCAGTAGCAGCCTGAGCCAACATGTTGCTCATTATCCTTTAAGTCAATCACTGGACTCAACATTTCCTGGCAAAGATGACTTAAAGTGTCTAAAATCAGATGAAAATAAAGAAAACCAGTTATCACAGGAGGAGACAGGGGGCAATGATTACCATAATTCTGGGGAATTTAAAAGTCCTGATCTTACACTTCCCCTTGGCATGGTATCTTTTGGAAGTCAACAAATATTTGAACCGAAAGGCATCATATCTGTTGACCAAGTTGAGAAAAATCATGAAGGAGATCCATCAACACCCAACCCTTCCCCTGGTGGAAATTGGAGAATTTGGCCTTTCTCCTTGAGGAGATCAGAATCTAGAAGTGCTTTGCCTCCTACTCCAGATGATGCCAAAAGCTCTCCTTTTAGTAATTCCTCAGAGAATAAGATTATCACAGATGTGAATGAAAATGATCTCAAACCCAATCTAATGAAAAAGAAAGTTAGGGAAACAAGTCCAACTTCTGAACAGTTAGCATCATTGAATCTGAAGGAAGGGAGGAACACTGTAACCTTCACTTTCTCTACAGCTGTGCTGGGGAAGCAGCAGGTTGATGCTCAAATTTTTTTGTGGAAATGGAACACTCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAAGTCAGATGTTCTTGGTCAGTTCATGCCTCTGGTTGGTGTTGACTGGTCACAGACAGGTGTTGCTCATTTATTCTCCGCTATCAAGGAGAATGGCTACCAACTGCTTTTTCTCAGTGCTCGTTCAATTTCTCAGGCCTATCTTACACGGCAATTCCTACTCAACCTCAAACAGGATGGGAAAGTTTTACCAGATGGTCCTGTTGTTATTTCCCCTGACGGTCTTTTTCCCTCTCTATACCGTGAAGTTATTAGGAGGGTTCCTCATGAGTTCAAAATTGCATGCTTAGAGGGCATCAAGGCACTTTTTCCTTCCGATAGCAATCCGTTCTATGCTGGTTTTGGAAACAGGGATACTGACGAAATCAGCTACCTCAAGGTTGGAATCCCTAAAGGGAAAATCTTCATTATTAATCCCAGGGGAGAGGTAGCTGTAAACCGAACTCTTGACACAAAATCATATACTTCTCTGCATGCTCTCGTGAATGGAATGTTCCCCCCTACAAACTCCTCTGAGCAGGAGGATTTTAATTCATGGAATTTCTGGAGGCTACCCCCTCCTGCTATAGATATTTGA 2709 0.4264 MQAVGRLGSYISQGVYTVSGPFHPFGGAVDIVVVEQEDGSFKSSPWYVRFGKFQGVLKAREKVVNICVNGVEADFKMYLDHKGEAFFLRESDAESLLMYPPSPSSGDSHSLRSKSCNFDSESGGEIVGRDSSRRSRILGLVFGRRSLKENVQDVNGNRIDSMERAKIAANLLELKWSGEDNQKMDDGLLHQGESNGEGCFDIAEDGGHDLNGKDVELEGCIEKQLNGKEVSGVSIVDAPGNDVSEEDIATDGVCCEASESSKVEQAHEVLYLADRHVHDEVLHGATELLSEGTETEEVTKNADLGMSVMEVSQLHAQAQKMDCSDSDVSMYDVADVEDLTTSPRPHTVTMDLGHCSSEKVETNCVAKPYSYSSQDDQALDENNMKEKDVSSTLLSPLDSLGDSLPRKASSRSPSPCSEDEHFLFSDLDENRINEQFEGSFSPEYVDKEDHLSDENGTEKLRVTSSPIVIPRNEDAGEEDGQHTGSLPNISSGSSSLSQHVAHYPLSQSLDSTFPGKDDLKCLKSDENKENQLSQEETGGNDYHNSGEFKSPDLTLPLGMVSFGSQQIFEPKGIISVDQVEKNHEGDPSTPNPSPGGNWRIWPFSLRRSESRSALPPTPDDAKSSPFSNSSENKIITDVNENDLKPNLMKKKVRETSPTSEQLASLNLKEGRNTVTFTFSTAVLGKQQVDAQIFLWKWNTRIVISDVDGTITKSDVLGQFMPLVGVDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYLTRQFLLNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEGIKALFPSDSNPFYAGFGNRDTDEISYLKVGIPKGKIFIINPRGEVAVNRTLDTKSYTSLHALVNGMFPPTNSSEQEDFNSWNFWRLPPPAIDI. 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01493 902 MobiDBLite consensus disorder prediction 441 457 - -
Seca4g01493 902 MobiDBLite consensus disorder prediction 579 640 - -
Seca4g01493 902 SUPERFAMILY HAD-like 694 843 IPR036412 -
Seca4g01493 902 SMART lns2 701 857 IPR031315 -
Seca4g01493 902 MobiDBLite consensus disorder prediction 525 549 - -
Seca4g01493 902 MobiDBLite consensus disorder prediction 437 498 - -
Seca4g01493 902 MobiDBLite consensus disorder prediction 384 420 - -
Seca4g01493 902 MobiDBLite consensus disorder prediction 621 636 - -
Seca4g01493 902 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Seca4g01493 902 MobiDBLite consensus disorder prediction 483 498 - -
Seca4g01493 902 PANTHER LIPIN 1 901 IPR026058 -
Seca4g01493 902 Pfam LNS2 (Lipin/Ned1/Smp2) 655 877 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01493 Seca-Chr4 24165764 24173062 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01493 4 24165764 24173062 Seca4g01493 4 24165764 24173062 ECH
Seca4g01493 4 24165764 24173062 Seca4g01493 4 24165764 24173062 PCT