Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01487 ATGGAGGATGTTGAAGACAAGCTGCATTCTAACTCATCTTCAAAAATTGCTGAAGAAACATCACTGGAAGAACATGTTGCAGACAAGCTACCCTCTGAGTCCCCTTCAAAAATTGCTGTAGAGACCCCTCTGGCAGAACATGTTGAAGACAAGCTATCCTCTGAGTCCCCTTCGAAAGTTGCTGTAGAGACACTTCTGGCAGAACATGTTGAAGACAAGCTACCCTCTGAGTCTGCTTCGAAAATTGCTGTAGAGACACCACTGGATGAACATATTAAAGACAAACTACCCTCTGAGTCCCCTTCAAAAATTGCTGCAGTGACACCACTGGATGAACATGTTGAAGACAAACTACCCTCTGAGTCCTCTTCAAAAATTTCTGTGGAGATACCACCGGCAGAAGCCCCTGAAGAAGATACTGAAGTGATAAACCCAATAGATAATCAATCTTTCACCGATGCTCCAACAAACCCACTTAGTAATGGAAAAGTGGAGTCTGGAATTCATTTGTCAGTGAATGAGTTCTCTGACTTAGCAGAGTTACCAAATGCTTCTGATGGTCAAACTATAATACAAGATGAGTATGTTTCTGTAGGTAATTCAGCTTCAACCCCAATTGCTTCTGTTGATGTAACAGAAGGAAGCCACCAGGTAGCTTTGGTTGAAGATTCTGAACCAGGCACTGTAGAAGATGCCTCTGAAAGGCATGAATTGCAGGATAATAATGTTACTAATGTCAGTGTGGACAGTGCTGTTGATAATGAGATTAGACTCTCAGCTTCCTCGTCTGAAGCAAAAGATTTTCAAAATGATCACAATGAACTAAATATAGCTGTGGGAACAGTTGACACACCCACTCATGCCAAGCTTGTTGATGCAAAAAGAGGCCTTATTGATACTGCAGCTCCATTTGAATCTGTCAAGGAAGCTGTTTCCAAGTTTGGAGGAATTGTGGATTGGAAGGCTCACAGGATCCAGACTGTGGAGAGACGCACTCTTGTAGAACAAGAACTTGACAAAGCACAAGAGGAGATCCCAGAGTACAGAAAACAAGCAGAGGCTGCTGAACAGGCAAAAGTTCAAGTACTAAAGGAGCTGGACAGCACAAAGAGACTAATAGAAGAATTAAAACTTAACCTAGAGAGGGCACAAACAGAAGAGCGTCAGGCAAGACAGGACTCGGAACTTGCAAAGCTCAGAGTGGAAGAAATGGAGCAGGGTATTGCAGACGAATCGAGTGTTGCAGCCAAGGCACAACTTGAGGTTGCTAAAGCTAGGTATACGGCAGCTATTTCAGATTTAATAGCTGTGAAAGAGGAGCTGGAAGCATTGCAAAAGGAATACGCTTCCTTAGTGACTGATAGAGATGTAGCTATTAAGAAAGCTGAAGAGGCAGTTACCGCATCAAAGGAAGTAGAGAAGTCAGTGGAAGATTTAACCATTGAACTAATTTCCGCAAAAGAGTCACTGGAGACTGCACATGCTGCACACTTGGAAGCAGAGGAACAAAGAATAGGGACAGTTATGGCAAGAGATCAAGATTCTCTCAATTGGGAGAAGGAACTTAAACAGGCAGAAGAAGAGCTCCAGAGGCTCAACCAGCAAATTTTGTCTGCGAAGGATCTCAAATCTAAACTGGAAACAGCCTCTGCTTTGCTGCTTGATTTGAAAGCTGAATTAACTGCTTATATGGAATCAAAGTTAAATCAGGAAGGTGATGAAGAAGGAATCTCAGAAGGAGGCCTAGAAGAACTAGAGAAGAAGAAGACACACACTGAAATACAAGAAGCAGTGGTATCAGCCAGAAAGGAACTTGAGGAAGTAAAGCTTAACATAGAGAAAGCAACTGCTGAAGTTAGTTGCTTGAAGGTAGCTGCTACATCACTAAAATCGGAACTTGAAGAAGAAAAATCAACTCTTGCTGCTATCAGGCAAAGAGAGGGAATGGCCTCCATTGCAGTTGCATCCCTTGAAGCTGAATTGGACAAGACTAGATCAGAAATAGCTTTAGTTCAGATGAAGGAGAAAGAAGCTAAAGAGAAAATGACTGAACTTCCCAAGATGCTACAACTAGCAGCTGAAGAGACTAATCAAGCCAACTTGCTTGCTCAAGCAGCTCGTGAAGAGCTGCAGAAAGTAAATGCAGAAGCAGAGCAAGCCAAGGCTGGAGTAAGTACCTTGGAAAGTAGATTACTTGCAGCTCAAAAGGAGATAGAGGCTTCAAAGGCTTCTGAAAAGTTGGCAATAGCAGCAATTAAAGCATTGCAAGAGAGTGAATCAAGTAGAAGCAACAATGAAGTGGACCCATCTACTGGGGTAACACTTTCTTTGGAGGAGTACTATGAGCTTAGCAAACGAGCTCATGATGCAGAAGAGCGAGCCAATATGAGGGTTGCATCTGCTAATTCTGAAATTGAGATAGCTAAGGAGTCTGAATTAAAATCCTTTGAGAAGTTGGATGAAGTGAATAGAGAGATAGCTGCTAGAAGAGAATCTTTGAAGATAGCAATGGAAAAAGCCGAGAAGGCAAAGGAAGGTAAATTAGGTGTAGAACAAGAATTAAGAAAGTGGAGAGCTGAACATGAGCAACGACGAAAGGCTGGTGAGTCTGGCCAAGGAGTGGCAAACCAGAATAAAAGCCCTAGGGGTAGTTTTGAGGGGAGTAATGAAGCAAATAATTTTGACCGGCCTCATGATGCAGCTAATTACTTGTCGAGTCCAAAGGCTGATGTGCATGCAGACTATGATGAAAGTGGATCATCTCCAGAAACAAAACATGGAAAAAAGAAGAAGAGGTCATTGTTCCCACGGGTTTTGATGTTCTTTGCTAGAAGAAAATCACAATCAAGCAAGTCAGGGTAA 2862 0.4249 MEDVEDKLHSNSSSKIAEETSLEEHVADKLPSESPSKIAVETPLAEHVEDKLSSESPSKVAVETLLAEHVEDKLPSESASKIAVETPLDEHIKDKLPSESPSKIAAVTPLDEHVEDKLPSESSSKISVEIPPAEAPEEDTEVINPIDNQSFTDAPTNPLSNGKVESGIHLSVNEFSDLAELPNASDGQTIIQDEYVSVGNSASTPIASVDVTEGSHQVALVEDSEPGTVEDASERHELQDNNVTNVSVDSAVDNEIRLSASSSEAKDFQNDHNELNIAVGTVDTPTHAKLVDAKRGLIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRTLVEQELDKAQEEIPEYRKQAEAAEQAKVQVLKELDSTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADESSVAAKAQLEVAKARYTAAISDLIAVKEELEALQKEYASLVTDRDVAIKKAEEAVTASKEVEKSVEDLTIELISAKESLETAHAAHLEAEEQRIGTVMARDQDSLNWEKELKQAEEELQRLNQQILSAKDLKSKLETASALLLDLKAELTAYMESKLNQEGDEEGISEGGLEELEKKKTHTEIQEAVVSARKELEEVKLNIEKATAEVSCLKVAATSLKSELEEEKSTLAAIRQREGMASIAVASLEAELDKTRSEIALVQMKEKEAKEKMTELPKMLQLAAEETNQANLLAQAAREELQKVNAEAEQAKAGVSTLESRLLAAQKEIEASKASEKLAIAAIKALQESESSRSNNEVDPSTGVTLSLEEYYELSKRAHDAEERANMRVASANSEIEIAKESELKSFEKLDEVNREIAARRESLKIAMEKAEKAKEGKLGVEQELRKWRAEHEQRRKAGESGQGVANQNKSPRGSFEGSNEANNFDRPHDAANYLSSPKADVHADYDESGSSPETKHGKKKKRSLFPRVLMFFARRKSQSSKSG. 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01487 953 MobiDBLite consensus disorder prediction 1 37 - -
Seca4g01487 953 Coils Coil 689 744 - -
Seca4g01487 953 MobiDBLite consensus disorder prediction 910 924 - -
Seca4g01487 953 Coils Coil 324 402 - -
Seca4g01487 953 Coils Coil 819 860 - -
Seca4g01487 953 MobiDBLite consensus disorder prediction 870 891 - -
Seca4g01487 953 MobiDBLite consensus disorder prediction 839 868 - -
Seca4g01487 953 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 296 944 - -
Seca4g01487 953 Pfam Weak chloroplast movement under blue light 295 864 IPR008545 -
Seca4g01487 953 MobiDBLite consensus disorder prediction 1 31 - -
Seca4g01487 953 MobiDBLite consensus disorder prediction 90 140 - -
Seca4g01487 953 Coils Coil 591 646 - -
Seca4g01487 953 Coils Coil 427 454 - -
Seca4g01487 953 MobiDBLite consensus disorder prediction 839 953 - -
Seca4g01487 953 Coils Coil 515 559 - -
Seca4g01487 953 Coils Coil 654 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01487 Seca-Chr4 24059217 24065563 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01487 4 24059217 24065563 Seca4g01487 4 24059217 24065563 ECH
Seca4g00604 4 9928398 9932790 Seca4g01487 4 24059217 24065563 PCT