Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01476 AATTGTGGGAAGGGGATTGAGAAGGAAAAGGGTTTCTTCAGGGCAAGAAGAAATAGTTTGGGTATTGGTAGCTCCAAAAGAGTGAAGAAAGAAGAATCAATGGAAGACGGTGAGATAGAAGAGGTGCCAGTCTCTACGGCGGAGGAAGACGAACATTCTTCAGAGCAGCGCAAATATGAGGAATCACCTTACGAAATGCTGCATAACAGCAAGGCTTCCATAGAGAAGATCGTCGCCGAGATGCTCTCCATCAAAAAAGAGGGTAAACCTAAGCAACTTCTACGAGATCTCGTTACTCAGATGTTCCTCCACTTCGTCATTCTCCGCCAGGCAAATCGCGCTATCTTGCTGGAGGAAGACCGTGTCAAAATGGAAACGGAACGTGCGAAGGCACCGGTAGACTTCACAACCCTGCAGCTTCACAACCTGATGTATGAGAAAAGTCACTACCTTAAAGCAATAAAAGCTTGCAAAGATTTCAAGTCAAAATACCCTGACATTGACCTTGTACCTGAGGAAGAGTTTTTCCGCGATGCTCCCCAAGATATTAAGGACTCTGTTTTGTCAAATGACAGTGCCCATAATCTGATGTTGAAGAGGCTCAATTTTGAGCTATTCCAGCGCAAAGAGCTCTGCAAACTTCATGAGAAACTGGAACAACAAAAGAAAGTCCTTTTGGAGACTATTGCAAACCGAAAGAAGTTCCTGACTAGTCTCCCTTCACATCTCAAGTCTCTTAAGAAAGCATCCTTGCCTGTACAAAACCAACTAGGACTTCTGCATACAAAAAAACTAAAGCAGCATCATTCAGCAGAGTTGCTTCCACCAGCTCTTTACGTGATTTACTCACAGCTGTTGGCTCAAAAGGAGGCCTTTGCAGAACCCATTGATCTTGAGATTATAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCGGAATCAAGCTCACAAGGACACTGGCATTTCTACTACTGTGGAGAGTTCCAAATTGGAGGATGATGTTCCTGACGAAGAAGAAGATGGTCAGAGACGTAGGAAAAGGCCAAAGAGGGTTCAGGTCAAGGAGAGCTCTGACCAGGGGGGAATATTACAAGTTCACCCACTTAAAATCATTATCCATGTGTATGAAGATGAACCTTCTGATCCTAAGCCTACAAAACTCATTACTCTAAGGTTTGAGTACTTGGTGAAGCTGAATATTATATGTGTTGGACTAGAAGGATCTAATGATGGTTCTGAGAATGACATCTTATGCAATTTATTCCCCAATGATACAGGACTTGAGCTTCCTCACCAGTCAGCCAAACTCTTTGTTGGGGATGCTATAACATTCAATACTCAAAGAACTTCACGTCCTTACAAATGGGCTCAGCACCTGGCAGGAATTGATTTCTTGCCTGAGGTGTCTCCATTGCTTCTAACTGACAACAGTGAAGCAGCCAAGAGTGAAGATGTTATCTCTGGTCTTTCACTGTATCGCCAACAGAACCGTGTACAGACAGTTCTGCAGAGAATTCGGTCCAGGAGAAAAGCTCAGTTGGCTCTTCTGTGA 1551 0.4384 NCGKGIEKEKGFFRARRNSLGIGSSKRVKKEESMEDGEIEEVPVSTAEEDEHSSEQRKYEESPYEMLHNSKASIEKIVAEMLSIKKEGKPKQLLRDLVTQMFLHFVILRQANRAILLEEDRVKMETERAKAPVDFTTLQLHNLMYEKSHYLKAIKACKDFKSKYPDIDLVPEEEFFRDAPQDIKDSVLSNDSAHNLMLKRLNFELFQRKELCKLHEKLEQQKKVLLETIANRKKFLTSLPSHLKSLKKASLPVQNQLGLLHTKKLKQHHSAELLPPALYVIYSQLLAQKEAFAEPIDLEIIGSLKDAQAFARNQAHKDTGISTTVESSKLEDDVPDEEEDGQRRRKRPKRVQVKESSDQGGILQVHPLKIIIHVYEDEPSDPKPTKLITLRFEYLVKLNIICVGLEGSNDGSENDILCNLFPNDTGLELPHQSAKLFVGDAITFNTQRTSRPYKWAQHLAGIDFLPEVSPLLLTDNSEAAKSEDVISGLSLYRQQNRVQTVLQRIRSRRKAQLALL. 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01476 516 MobiDBLite consensus disorder prediction 46 64 - -
Seca4g01476 516 MobiDBLite consensus disorder prediction 24 64 - -
Seca4g01476 516 Pfam Fms-interacting protein/Thoc5 108 464 IPR019163 -
Seca4g01476 516 Coils Coil 208 228 - -
Seca4g01476 516 MobiDBLite consensus disorder prediction 321 359 - -
Seca4g01476 516 PANTHER FMS INTERACTING PROTEIN 49 515 IPR019163 -
Seca4g01476 516 MobiDBLite consensus disorder prediction 338 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01476 Seca-Chr4 23952980 23956082 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01476 4 23952980 23956082 Seca4g01476 4 23952980 23956082 ECH
Seca4g01476 4 23952980 23956082 Seca4g01477 4 23956253 23958712 PCT