Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g01442 ATGATCCATCCGATACTTGTTGCGGTGGCAGCTTCTGCGGTAGGATGTGTTACAACCGCTTTATTGGTTTTTATTTGGCGTAAGTGTCATCACAAAAAGCGTAGAAATTTTGTTGAACCTGCTAGCTTGACCAGAATTGAGAGTCTCCAAGAAGGGATTTCTAGATTTCATCAACAACCTACTTTTCATAACCAATTGGATCAGGGGAGCAAGAACAAGGTAAATTATTATGTGTTTCGAGGTGGGGTTTCTGGAAGAAGTGGTTTGTTCAGTTGGGCTGATAATCCATCTATGGCCGTTGATGCTGGTGAAAATGGATGGTCTAGATTTGCTTTCACTGGGTATAAGAGCTACATGCCATCTTCTTCAAAAAGGTCTACACTTTTAGGAGTGTGTGCAGCACCAGCAGTTGGTGATTATGGTAAAGAATCAGAGGCTGAGATAAGCTGGGAAGTATCAAGGGGATCAGCTGAGTTTATGCAGAAGGTAAGATTGAATCCTGGGATGAAAAAGTCTCATAAAAACAACAACACTTCTTCTATGACTGTTGCTTCTGTTATTAGAACAGCTTTGCCATTGCCTGGCCCTACTTTGGGAAACTATGCATTCCCACAAGAGGCCTATTTTGAAATTACCATCTTGTATTCTCGTGGGGATGATTATGAATCGGTTGGAAAGAATAGAGAAGGTGAGAAGACCATGCTTCTCATTCAAGGTAATTCAAATGCTAAAGGGAATTCTGAGGCTTTGGTTCATGTTACTAGTAGCAATGGCCATAAAATCAACAATGTTGAAGAAATGAAGCTTGACAGCAAACAGGGTGGGAAGAGTGAATCTGTGATGTTCTCATTGGGATTAACAATAGGAGGTCCTCTTCTTTTGAAAGTTCCTGGCAGCTACCCTGGGAGCATTGGGTTTAACTCCAATGGTTCTGTCTATCTTGATGGAATGAAACTTGTATTTGAATCTGAGAAGGCAGAATGGATAGGAACTGATAAGGTGATTGGTTGTGGGTTTGATCCAAGGCAGAAAAAAGTTTTCTTCACAGTAGACTCAGAATTAGTGCATGTGATCCACTGCCAAACAGAGGAATTTGGCACTCCACTCTATCCAACCTTGGCTGCAAATATAGACATTCTAGTATTAGTTAATTATGGACAGAGTCCATTTAAATATGCACCTGCAAATGCCCAGAGAACACCAAATCCATGTTTTATAGCCCCACTTGTAAATTCCCCTGCTGCCACCCTTGGCTATGAGGACAGCAAGGAGCTATTCTCTATGGGAAGGATTGATTCTCAATGGCTTAGTCGATCTACAACCAAAGGAAGTCACAACAATGGGAACAATAATCGAACTATCGATTTTGATGAGGAGTCTGAGGCTGATCTATTTGAAATAATCTTAGATGGTTCTGGAAAATCTCCAAACACAGCATCATAG 1443 0.4109 MIHPILVAVAASAVGCVTTALLVFIWRKCHHKKRRNFVEPASLTRIESLQEGISRFHQQPTFHNQLDQGSKNKVNYYVFRGGVSGRSGLFSWADNPSMAVDAGENGWSRFAFTGYKSYMPSSSKRSTLLGVCAAPAVGDYGKESEAEISWEVSRGSAEFMQKVRLNPGMKKSHKNNNTSSMTVASVIRTALPLPGPTLGNYAFPQEAYFEITILYSRGDDYESVGKNREGEKTMLLIQGNSNAKGNSEALVHVTSSNGHKINNVEEMKLDSKQGGKSESVMFSLGLTIGGPLLLKVPGSYPGSIGFNSNGSVYLDGMKLVFESEKAEWIGTDKVIGCGFDPRQKKVFFTVDSELVHVIHCQTEEFGTPLYPTLAANIDILVLVNYGQSPFKYAPANAQRTPNPCFIAPLVNSPAATLGYEDSKELFSMGRIDSQWLSRSTTKGSHNNGNNNRTIDFDEESEADLFEIILDGSGKSPNTAS. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g01442 480 Gene3D - 142 400 IPR043136 -
Seca4g01442 480 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 49 469 IPR043364 GO:0098609
Seca4g01442 480 SUPERFAMILY Concanavalin A-like lectins/glucanases 293 392 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g01442 Seca-Chr4 23345242 23347822 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g01442 4 23345242 23347822 Seca4g01442 4 23345242 23347822 ECH
Seca4g01442 4 23345242 23347822 Seca4g01442 4 23345242 23347822 PCT