Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00604 ATGGCAGCTGTGCCCGATCAAGCCACTAGTATATGCACTCACTGTGATCGGGCTATCCCTGCTGCAAATATTGATTTGCATTATGCTCATTGCTCTCGGAACCTTGAAAAATGCAAAATTTGTGGTGACATGGTTCCAAAACAACATGCTGAGGAGCACTATTTAAGCACTCATGCGCCGGTATCCTGCTCATTGTGCAGTGAGACAATGGAGCGTGATATTTTAGATATCCATAAAGGTGAAAATTGCCCTCAAAGGATTGTCACCTGTGAGTTTTGTGAGTTCCCATTGCCAGCAATTGATCTGGCTGAGCATCAGGAAGTATGCGGTAATCGAACAGAGCTTTGTCTCCTTTGTAACAAATATGTTAGACTGCGTGAAATATACAACCATGGAGAAAATTGTAATATAACCCAAGACAATGCTGCAGGGTCTTCAAGGGACGTGAGGCCAGCTGAAAGAGATAGGGGTGCTCGAAGAAGGCAGCAGAATGAATTCTCAAAAAGACGTCTTCTTTTCACAATAGCAATCACTGGTATCGCTGTTATACTCGGATCTATTTTTTTCCAGAGAAAGGCAGAGCCCAGTAATATGCATTAG 600 0.4317 MAAVPDQATSICTHCDRAIPAANIDLHYAHCSRNLEKCKICGDMVPKQHAEEHYLSTHAPVSCSLCSETMERDILDIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCLLCNKYVRLREIYNHGENCNITQDNAAGSSRDVRPAERDRGARRRQQNEFSKRRLLFTIAITGIAVILGSIFFQRKAEPSNMH. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00604 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 111 IPR013083 -
Seca4g00604 199 MobiDBLite consensus disorder prediction 140 162 - -
Seca4g00604 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 57 IPR013083 -
Seca4g00604 199 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 6 193 - -
Seca4g00604 199 MobiDBLite consensus disorder prediction 147 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00604 Seca-Chr4 9928398 9932790 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00604 4 9928398 9932790 Seca4g00604 4 9928398 9932790 ECH
Seca4g00604 4 9928398 9932790 Seca4g01487 4 24059217 24065563 PCT