Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00600 ATGGCATCGCTTACCTCTCTGTCTTCTTCTCCTTTTCTTCAACTAGAATTTCCATTAAAGACCAAGAGATCCTCCTCCATGCGTTCTTTTTCTGTTAATCCAATCAAAGCCTCAATCTCAGAATCGGAGGCACCATCATTATCAGTTTCACCTGAGACCAAAAACCTTCCAATGCGCAAAATCCCCGGAGATTACGGTTTCCCTTTTATAGGACCCATCCAAGACCGTCTCGATTATTTCTACAACCAAGGCCGTGACAAGTACTTCCAATCCCGAATCCAAAAGTACCAGTCAACCGTTTTTCGCGCCAACATGCCACCAGGTCCTTTCGTTTCCTCTAACCCAAACGTCGTCGTTTTGCTCGACGGTAAAAGCTTCCCTGTCCTCTTCGACGTCACCAAAGTCGAAAAGAGAGACCTCTTCACTGGAACCTTCATGCCTTCCACCGAACTCACCGGCGGTTACCGAATCCTCTCCTATCTCGATCCATCCGAGCCAAAACACGAGCAACTCAAACGCCTCATGTTCTTCCTCCTCAAGTCTAGCAGCAGCAAGATCATCCCTGAGTTCCATTCAAGCTACACACAACTCTTTGACACCTTGGAGAAAGAACTCGCTGCTAAAGGCAAAGCGAATTTCGGAGATGCTAATGATCAAGCAGCATTTAACTTCCTCGCTCGTTCTCTTTACGGCACTAACCCCTCCGATACAAAACTCGGACGTGAAGGTCCAGCAATAGTGCAGAAATGGGTTCTGTTTCAACTCAGTCCTATTCTTATCTTGGGACTTCCACCGCTTCTAGAAGATTCTATTTTCCACACGTTCCGTCTCCCTCCTTTTTTGATAAAGAAAGATTACCAGAAACTATACAATTTCTTCTATGAATCATCTGGTCCTGTGCTTGACGAAGCGATGCGTCTTGGCGTGTCTAAAGAAGAAGCTTGTCATAATCTGTTATTTGCCACGTGTTTTAATTCGTTTGGTGGCATGAAGATTTTTTTCCCCAACACGCTGAAATGGATTGGACGTGCGGGTGTGAAGCTTCACACTTGTTTAGCGGAGGAGATTAGGTCTGCCGTTAAATCTAACGGCGGAAAGGTGACTATGGCGGCGATGGAAATGATGCCGTTGATGAAATCTGTGGTTTATGAAGCGCTTCGAATTGAGCCGCCAGTGCCGTTGCAGTATGGGAAGGCGAAGAGGGATTTGGTTATTGAGAACCATGAGAATGCTTTTGAAGTGAAAGAAGGGGAAATGTTGTTTGGGTTTCAACCGTTTGCGACTAAGGATCCTAAGATATTTGAGAGAGCGGATGAGTTTGTTGGGGATAGGTTCTTGGGGGAAGGGGAGAAGTTGTTGAAGCATGTGCTTTGGTCGAATGGTCCTGAGACGGAGCAACCAACTGTTGGTAACAAGCAATGTGCTGGGAAGGATTTCGTGGTGTTGGTTTCTAGACTTCTGGTGGTGGAACTGTTTCTCCGTTATGATTCGTTTGACATTCAAGTGGGAAAGTCGCCGTTGGGATCTTCCGTCACCATCACCTCTCTCAAGAGGGCAAGCTTTTAA 1566 0.4617 MASLTSLSSSPFLQLEFPLKTKRSSSMRSFSVNPIKASISESEAPSLSVSPETKNLPMRKIPGDYGFPFIGPIQDRLDYFYNQGRDKYFQSRIQKYQSTVFRANMPPGPFVSSNPNVVVLLDGKSFPVLFDVTKVEKRDLFTGTFMPSTELTGGYRILSYLDPSEPKHEQLKRLMFFLLKSSSSKIIPEFHSSYTQLFDTLEKELAAKGKANFGDANDQAAFNFLARSLYGTNPSDTKLGREGPAIVQKWVLFQLSPILILGLPPLLEDSIFHTFRLPPFLIKKDYQKLYNFFYESSGPVLDEAMRLGVSKEEACHNLLFATCFNSFGGMKIFFPNTLKWIGRAGVKLHTCLAEEIRSAVKSNGGKVTMAAMEMMPLMKSVVYEALRIEPPVPLQYGKAKRDLVIENHENAFEVKEGEMLFGFQPFATKDPKIFERADEFVGDRFLGEGEKLLKHVLWSNGPETEQPTVGNKQCAGKDFVVLVSRLLVVELFLRYDSFDIQVGKSPLGSSVTITSLKRASF. 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00600 521 FunFam Allene oxide synthase, chloroplastic 56 521 - -
Seca4g00600 521 Pfam Cytochrome P450 352 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00600 521 PANTHER CYTOCHROME P450 26 56 495 - -
Seca4g00600 521 Gene3D Cytochrome P450 52 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00600 521 PRINTS E-class P450 group IV signature 428 446 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00600 521 PRINTS E-class P450 group IV signature 375 391 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00600 521 PRINTS E-class P450 group IV signature 474 492 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca4g00600 521 CDD CYP74 90 514 - -
Seca4g00600 521 SUPERFAMILY Cytochrome P450 57 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00600 Seca-Chr4 9841288 9842853 Dispersed/Wgd