Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00584 ATGCAATCTGAGCCAGGACCAAAACCAAAACCAACACTCCTATTCTTTCTCATCTTCTTGTTGTGTTGTCCCTCCTCCAACACCACTTCCATCAGTAATAATGCCGTAAATTCAAACACCAAAATCACCCATCAATTCAAAGAAGCCCCTGAATTCTACAATTCCCCTGATTGCGCCTCCATTACCGACAATTCAAACACCGACAACAACAACAATGAAGAGGAAGAAGAAAGTGACAACTACATGTGCTCCGATGAATCAGTACACGTTGCAATGACTCTTGACACCACCTACATCCGTGGATCCATGGCGGCAATCCTCTCTGTCCTCCAACACTCTTCCTGTCCTCAAAACATATTCTTCCACTTCGTTTGTTCCTCCAACGCGTCCCTCTTACGCGCCGCAATCTCCACCTCATTTCCTTACCTCAAATTCCAACTCCACAATTTCAAAGACTCCATAGTCTCAGGCCTAATCTCCACCTCCATTCGCTCAGCACTCGATTGTCCTCTCAACTATGCTCGTAGCTACTTAGCTAACCTCTTACCACTCTGCGTTCGGCGAGTGGTGTACCTTGACTCAGACCTCATCCTTGTTGATGACATTGCCAAATTAGCAGCAACACCATTAGGGGAAAACAAGGTATTAGCAGCCCCTGAATATTGCAACGCCAATTTCACTTCCTATTTCACCCCAACATTTTGGTCCAATCCTTCTCTGTCTCTCACCTTTGCCAATAGGAAGCCCTGTTATTTCAACACAGGGGTGATGGTGATCGATCTTGAACGGTGGCGTGCAGGGGATTACACTACCAAGATTGAGGAATGGATGGAGCTTCAGAAGAGGATGAGAATCTATGAGCTTGGTTCACTGCCTCCATTTTTGCTTGTTTTTGCTGGGAATATTGCTCCTGTGGATCATAGGTGGAATCAGCATGGTCTTGGCGGTGATAATTTTCGTGGTTTATGCAGAGATCTGCATCCTGGTCCTGTGAGTCTGTTGCATTGGAGTGGGAAAGGTAAGCCATGGGTTCGATTGGATGCTAATAGGCCTTGTCCTTTGGATGCACTTTGGGCACCCTATGATCTATTACAGACTCCGTTTTCTCTTGATTCTTGA 1119 0.4593 MQSEPGPKPKPTLLFFLIFLLCCPSSNTTSISNNAVNSNTKITHQFKEAPEFYNSPDCASITDNSNTDNNNNEEEEESDNYMCSDESVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNIFFHFVCSSNASLLRAAISTSFPYLKFQLHNFKDSIVSGLISTSIRSALDCPLNYARSYLANLLPLCVRRVVYLDSDLILVDDIAKLAATPLGENKVLAAPEYCNANFTSYFTPTFWSNPSLSLTFANRKPCYFNTGVMVIDLERWRAGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGNIAPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLQTPFSLDS. 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00584 372 SUPERFAMILY Nucleotide-diphospho-sugar transferases 88 363 IPR029044 -
Seca4g00584 372 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 16 365 - -
Seca4g00584 372 FunFam Hexosyltransferase 89 352 - -
Seca4g00584 372 Pfam Glycosyl transferase family 8 89 345 IPR002495 GO:0016757
Seca4g00584 372 MobiDBLite consensus disorder prediction 61 80 - -
Seca4g00584 372 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 352 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00584 Seca-Chr4 9623867 9624985 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00584 4 9623867 9624985 Seca4g00584 4 9623867 9624985 ECH