Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00576 ATGGAGTCAGAACTAAAAGACCTGAATTCGAAACCAGCGAAATTAAATGGCAATACCAATAGCAATAGCGTTCGGGATGATCGTCCTCTCCTGAAATCGGATTCGGTCTCGGCCTCCTCCGATACCGTGGACCTACAGGACCTTGAGAAGAAATTCGCTGCTTTTGTTCGGCGTGACGTTTACGGAACCATGGGGCGTGGAGAGTTGCCTGCTAAGGAGAAGCTCTTGCTTGGTTTCGCTTTGGTCACTCTCCTTCCCATTAGAGTCCTCCTCGCCATAACTGTATTGCTCTTTTATTACTTAATTTGTAGGGTTTGTACCCTCTTCTCTGCCCCAAACAGGGAAGATGAACAGGAAGATTATGCTCACATGGGTGGATGGAGGAGGGCCGTCATCGTTTGGTGTGGGAGAGCCCTCTCCAGGATCATGCTTTTCATTTTTGGCTTTTATTGGATCCCTGAATCTTACCTCGTTCCCCAGGCTCATCACAACTCTACCACTCAGCTTAGCATATTTAATTTTAGTTTTACTTATTTCTTCTGTCTGGTTCAATTTAAGAAGGAAGATAAACGTCAGCCTGAAGAGATGGGAAGACCAGGAGTAATAATATCTAATCACGTGTCATACTTGGATATTTTGTATCATATGTCTTCCTCGTTCCCAAGTTTTGTTGCTAAGAGATCAGTGGCTAAACTTCCTCTCGTTGGTCTCATCAGCAAGTGCCTTGGTTGTGTCTATGTTCAGCGGGAATCAAAGTCATCAGACTTCAAGGGTGTTTCAGCTGTTGTCACTGAAAGAATTCGAGAAGCTCATCAGAATGAATCTGCTCCATTAATGATGTTATTTCCAGAAGGTACAACCACAAATGGAGATTTTCTCCTTCCATTCAAGACTGGTGGTTTCTTGGCAAAGGCACCAGTGCTTCCTGTAATTTTACAATACCATTACCAGAGATTTAGCCCTGCCTGGGATTCCATATCTGGGGTGCGCCATGTGATATTTCTCCTCTGTCAGTTTGTAAATTATATGGAGGTGATACGATTACCTGTTTACCATCCCTCGCAGCAGGAGATGGATGACCCCAAACTATATGCTAATAATGTTAGAAGGTTGATGGCTAGTGAGGGCAATTTGATACTTTCTGATATTGGGCTAGCTGAAAAACGAATATATCATGCTGCTCTCAATGGTAATAATAGCCTGCCTAGTGTTTTGCATCAGAAAGACGATTGA 1233 0.4355 MESELKDLNSKPAKLNGNTNSNSVRDDRPLLKSDSVSASSDTVDLQDLEKKFAAFVRRDVYGTMGRGELPAKEKLLLGFALVTLLPIRVLLAITVLLFYYLICRVCTLFSAPNREDEQEDYAHMGGWRRAVIVWCGRALSRIMLFIFGFYWIPESYLVPQAHHNSTTQLSIFNFSFTYFFCLVQFKKEDKRQPEEMGRPGVIISNHVSYLDILYHMSSSFPSFVAKRSVAKLPLVGLISKCLGCVYVQRESKSSDFKGVSAVVTERIREAHQNESAPLMMLFPEGTTTNGDFLLPFKTGGFLAKAPVLPVILQYHYQRFSPAWDSISGVRHVIFLLCQFVNYMEVIRLPVYHPSQQEMDDPKLYANNVRRLMASEGNLILSDIGLAEKRIYHAALNGNNSLPSVLHQKDD. 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00576 410 SMART plsc_2 200 315 IPR002123 GO:0016746
Seca4g00576 410 CDD LPLAT_LPCAT1-like 141 389 IPR045252 GO:0008374
Seca4g00576 410 Pfam Acyltransferase 193 310 IPR002123 GO:0016746
Seca4g00576 410 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 43 392 - -
Seca4g00576 410 MobiDBLite consensus disorder prediction 12 26 - -
Seca4g00576 410 MobiDBLite consensus disorder prediction 1 35 - -
Seca4g00576 410 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 142 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00576 Seca-Chr4 9390116 9396885 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00576 4 9390116 9396885 Seca4g00576 4 9390116 9396885 ECH
Seca4g00576 4 9390116 9396885 Seca4g00576 4 9390116 9396885 PCT