Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g00517 ATGGGGTCAGCTTGTTGTGTTGCTGCAAAGGATCATACTCTTCCCAACAGAACTAGAAGTGAAAATTTGTATAGTACTGTATGTTCGCCAGAGTGGAGCTTTCAATGGGATAGATGGGGCCATGCTGCTGGTGAAATTGAGGATCCTTCCTTTCACACATCTCACGGAGTCAACAGACATGTCAGCATGGAGTTAAAGCGGTCACTAAGTTCTGGAAGAGGCAGTTTATCTGATGGGGGAAGCACCCTGGAGAATTCTGTAACACCCATGTGTCAGAAGTCTCCTAGTCATGAGCAATTGGTTGCAAATCAGATGACTCCATCTTCAGATCTATCCCTGTCAAGTAATTGTTCTAATGTGGTGAAGAATCTGACAGAATCACCAGAGATTGGAGAATCTTCAACACCTTCAGTTTTCACACCTATAACAGATCCAACGCCCAATCTTAATTATCACAATCACCCTATCTCAACACCATCAAGATGGGCTCATCGATCTCCAGGACACCCACTGTTGAGACAAATTTCTGACAGTCGAATCCAGGGCCTAAAATCACCTGACAACTCAATATCTGAGGGAAGGCCATCATTTGTACTCTCCAGTTGCAGCAATGACATGGTAACTGGATCCCAAAGTGGGCCATCTGATGGCTGGTCTATGCGCACCTTTTCTGAACTGGTGGCTTCATCTCAAAAGGAACGGTGGTCTTTTGATAGCGAGTATTTAGGTTCAGGTCGTCTCAAGATAAGTGGGACTAGCAGCAGATTCTCATATTCTCCCTCAATGGATTTACAATCTTGTGGGGCTTGCTCCAAGCTTTTGACTGAGAGATCTGCATGGAGCAGTCAGAAATTTATTGCCGGCAGTGACCTCTCAGTTGTTGCTGTACTGGTCTGTGGTCATGTTTATCATGCAGAATGCTTGGAGACAATGACACCGGAGGCTGATAGTTACGATCCAGCATGTCCAGTTTGTATGGTTGGAGAGAAGCACTTGCCTAAGTTGTCCAAGAAAGGTGTTAGGGCTGAATCAGAGATAAAGGCCAAGAACTACAAGATATCCCGAAACCGAGTAGTTGATAGCTACCTTGATGGTGGCTTGGATGTTTTTGATCGCCAAAAAGATATAGTTTCAAAAATGGAGCCTAGCTCCAGTGCAAGGAGATCATTTGGAAAACCCTTCTTGAGGCGGCATTTTTCACTGGGATCCAAGTGGGGCCGATCCCAGTCGGAGAATGATGCTGCCAGGAAAAAGGGCTTTTGGGCGAGATATCATACTAGAGATTAA 1287 0.4522 MGSACCVAAKDHTLPNRTRSENLYSTVCSPEWSFQWDRWGHAAGEIEDPSFHTSHGVNRHVSMELKRSLSSGRGSLSDGGSTLENSVTPMCQKSPSHEQLVANQMTPSSDLSLSSNCSNVVKNLTESPEIGESSTPSVFTPITDPTPNLNYHNHPISTPSRWAHRSPGHPLLRQISDSRIQGLKSPDNSISEGRPSFVLSSCSNDMVTGSQSGPSDGWSMRTFSELVASSQKERWSFDSEYLGSGRLKISGTSSRFSYSPSMDLQSCGACSKLLTERSAWSSQKFIAGSDLSVVAVLVCGHVYHAECLETMTPEADSYDPACPVCMVGEKHLPKLSKKGVRAESEIKAKNYKISRNRVVDSYLDGGLDVFDRQKDIVSKMEPSSSARRSFGKPFLRRHFSLGSKWGRSQSENDAARKKGFWARYHTRD. 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g00517 428 SUPERFAMILY RING/U-box 266 326 - -
Seca4g00517 428 ProSiteProfiles Zinc finger RING-type profile. 267 325 IPR001841 -
Seca4g00517 428 PANTHER EXPRESSED PROTEIN 1 330 - -
Seca4g00517 428 SMART ring_2 267 325 IPR001841 -
Seca4g00517 428 MobiDBLite consensus disorder prediction 68 115 - -
Seca4g00517 428 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 327 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g00517 Seca-Chr4 8371809 8375623 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g00517 4 8371809 8375623 Seca4g00517 4 8371809 8375623 ECH