LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca4g00475	ATGGCGGAAGAGATCAGCAAGAACGACGCCGGATTATCTTCCAAAACAAAACGCCTCCTGTCATGGCCTTCTGTTCTCCGTTGGATTCCGACTTCTACTGATCGTATTATCGCTGCCGAGAAGCGTCTTCTTTCCATTGTCAAGACCCGCTATGTTCAAGAACACGTTAATGTTGGCTCTGGTCCTCCTGGGTCCAAAGTTAGATGGTTCCGATCATCGAGCAACGAACCGCGGTTTATTAACACTGTCACATTTGACAGTAAACCTGATTCTCCTACGCTTGTTATGATTCATGGATATGCTGCTTCCCAGGGTTTCTTTTTTCGCAATTTTGATGCTCTTGCCTCTCGTTTCAGAGTTATTGCTGTTGATCAACTCGGTTGGGGTGGATCAAGCAGGCCTGATTTTACATGCAGAAGCACTGAAGAAACTGAGGCATGGTTCATTGATTCATTTGAGGAATGGAGAAAAGCAAAAAACCTGAACAATTTCATACTACTTGGACATTCTTTTGGTGGTTATGTTGCTGCGAAATATGCCCTCAAGCACCCTGAGCACGTACAGCACTTGATTTTGGTGGGATCCGCTGGATTTTCATCAGAATCAGATGCAAAGGCTGAGTGGGTTACAAGGTTTCGAGCAACATGGAAGGGAGCAGTGCTGAACCATCTCTGGGAATCTAATTTTACTCCTCAAAAACTTGTCAGAGGTTTAGGTCCTTTGGGTCCTAACATAGTCCGAAGGTATACAAGTGCTAGGTTTGGTACATATTCAACTGGGGAAATACTGACTGAAGAGGAATCAAGTTTGCTTACAGATTATGTTTACCATACATTAGCGGCCAAAGCTAGTGGGGAGCTGTGCTTAAAGTATATTTTTTCATTTGGAGCATTTGCCAGAAGTCCCCTTCTTCTCAGTGCCTCAGAGTGGAAGGTACCCACCACTTTCGTATATGGTTTCGAAGACTGGATGAATTATCAAGGTGCCCAAGAAGCTCGCAAGCATATGAAGGTTCCATGTGAAATCATCAGGGTCCCTAAGGGTGGGCACTTTGTGTTCATTGACAACCCAACTGGCTTCCATTCAGCTGTGTTTTATGCTTGTCGAAGGTTTCTTAAACCAGATCCAGACAATGAATCTCTTCCTGAAGGGCTAACCTCTGCATAG	1167	0.4456	MAEEISKNDAGLSSKTKRLLSWPSVLRWIPTSTDRIIAAEKRLLSIVKTRYVQEHVNVGSGPPGSKVRWFRSSSNEPRFINTVTFDSKPDSPTLVMIHGYAASQGFFFRNFDALASRFRVIAVDQLGWGGSSRPDFTCRSTEETEAWFIDSFEEWRKAKNLNNFILLGHSFGGYVAAKYALKHPEHVQHLILVGSAGFSSESDAKAEWVTRFRATWKGAVLNHLWESNFTPQKLVRGLGPLGPNIVRRYTSARFGTYSTGEILTEEESSLLTDYVYHTLAAKASGELCLKYIFSFGAFARSPLLLSASEWKVPTTFVYGFEDWMNYQGAQEARKHMKVPCEIIRVPKGGHFVFIDNPTGFHSAVFYACRRFLKPDPDNESLPEGLTSA.	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca4g00475	388	PANTHER	RE40534P-RELATED	25	365	-	-
	Seca4g00475	388	SUPERFAMILY	alpha/beta-Hydrolases	82	364	IPR029058	-
	Seca4g00475	388	PRINTS	Alpha/beta hydrolase fold signature	166	179	IPR000073	-
	Seca4g00475	388	PRINTS	Alpha/beta hydrolase fold signature	180	193	IPR000073	-
	Seca4g00475	388	PRINTS	Alpha/beta hydrolase fold signature	117	132	IPR000073	-
	Seca4g00475	388	Gene3D	alpha/beta hydrolase	50	368	IPR029058	-
	Seca4g00475	388	Pfam	alpha/beta hydrolase fold	92	208	IPR000073	-
	Seca4g00475	388	PRINTS	Epoxide hydrolase signature	345	367	IPR000639	GO:0003824
	Seca4g00475	388	PRINTS	Epoxide hydrolase signature	312	328	IPR000639	GO:0003824
	Seca4g00475	388	PRINTS	Epoxide hydrolase signature	117	132	IPR000639	GO:0003824
	Seca4g00475	388	PRINTS	Epoxide hydrolase signature	180	193	IPR000639	GO:0003824
	Seca4g00475	388	FunFam	Probable 1-acylglycerol-3-phosphate O-acyltransferase	78	368	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca4g00475	Seca-Chr4	7693799	7698615	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca4g00475	4	7693799	7698615	Seca4g00475	4	7693799	7698615	ECH
	Seca4g00475	4	7693799	7698615	Seca4g00475	4	7693799	7698615	PCT