Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g11875 ATGGATGAGATGGGACTGAATTCCATGACACTCAGAATCAAAATGTTTTTTCTTTTGTTTTTCATATCTTCCCCTGTAATTCTAATGGCTACATTAATGTACCAAAGCTCTAGTTTCAGACTTTTTGTGGGGTTTCCGTTTTCCAAAGGCAAAGGCAAGGTACTAGAACCTCACAACAACTTTACAGCTGAATTATTGTTGACTGGAACTGGAGGGCCAAACGTTACAACTAATGCCTCTGGATTGGGAACAGAGATCCAAAATACAACATCACATAAGGACTTAGGAGGAAGAGATGAAATCAGTGATGTTAAGGTGCTGTCAGGGGAAACTCAAAATGGTACTGATGCTAAAGGAACAACAGAGAATCTAATAGCAGCAGAAGTAGGCCTCAAAAATGGCAGTTCAACAAATGATTCAGGGATCCCTGATGACAGAGACAAACTGCTTCATGGACTATTAGCTTCTGGATTTGATGAAGCATCATGCATAAGCAGGCTACAATCCTACTTATACCGCAAAGCAGCTTCTCCTCACAAAGCTTCTCCATATTTGATATCTAAACTACGCAACTATGAAGAAATTCACACAAGGTGTGGACCAAATAGTAGAGCTTACAACAGAAACATGATAAGGATTGTGCATTCTAAGAACAATGGTAATGGTGTTGCTGCTGCAATGTGTAAATACCTTGTCTGGACTCCTGTCAATGGTTTGGGAAACCAAATGATTAGCATTGCTGCAACATTTCTTTATGCAATCCTCACAGACCGAGTTTTGCTTGTCAAATTTGGAAAAGACAAACATGGCCTATTTTGTGAGCCATTTCTCAATTCAACTTGGATATTGCCTGACAAGTCTCCTTTTTGGAATGAAAATCATGTCCAAACATATCAGAGAATGCTAGAGAAGGACAGGGCTAGTGCTAACAATTCAAAAGAGGATCATAAGGGTTTACCATCAGCATTGTTTCTTAATCTACAACATACCCGCAGTGATCCAGAGAAATTATTTCACTGTGATCATAGTCAAGATCTTCTCCGGAAGGTTCCTTTGTTGATTTTGCAGTCAGATCAGTATTTTGTCCCTTCTCTGTTCATGACCCCATCTTTCAACTTGGAGATTACCAAAATGTTCCCAGAAAAAGACACAGTCTTTCACCATTTGGGGCGTTATCTATTTCACCCTTCAAATGAGGCATGGGGACTAATCAGCAGATTCTATAAGGCACACTTGGCCAAAGCAGATGAGAGGATAGGCCTTCAGATAAGAGTGTTTCGTCCTGTTTCAACTCCACCGCAAGCAGTTATGAATCTAGTTTTGAATTGCACCATAATGAATAAGTTACTGCCAGAAGTAGTAGATATGCAAAATTCAGTGTCTTTTGCTAGCAAAAACCAGATGGTAAAGGCTGTTCTTGTGGCATCTTTATATGCAGAGCATGGCGAGATTTTACAGACTAAGTATATGAAAAAAGCAACAGTTACTGGGGAGGTAATAGAGGTTTATCAGGCAAGTCATGAAGAGCGTCAAAAGTATAATGATAATAAGCATAATATGAAAGCATGGACGGAGATGTATCTACTGAGTTTATCTGATGTGTTGGTGACTACCTCTCTTTCTACATTTGGGTATGTTGCTCAGGGTTTGGGGAATTTGAGGCCATGGCTTCTTTACAAGCTAACAAATAACGAGACCCATTTTCCAGCATGTGAAAGGGACTTGTCATTGGAACCTTGTTATCACACTCCTCCCAAGCATTACTGCAATGGAAAGCCCATCAAAGATTTTGCTTCTTCTTTCCCTTATATGAGGGAATGCAAGGATTTTGGTTTTGGTGTGAAGCTGGTCAATGGTTAA 1860 0.3984 MDEMGLNSMTLRIKMFFLLFFISSPVILMATLMYQSSSFRLFVGFPFSKGKGKVLEPHNNFTAELLLTGTGGPNVTTNASGLGTEIQNTTSHKDLGGRDEISDVKVLSGETQNGTDAKGTTENLIAAEVGLKNGSSTNDSGIPDDRDKLLHGLLASGFDEASCISRLQSYLYRKAASPHKASPYLISKLRNYEEIHTRCGPNSRAYNRNMIRIVHSKNNGNGVAAAMCKYLVWTPVNGLGNQMISIAATFLYAILTDRVLLVKFGKDKHGLFCEPFLNSTWILPDKSPFWNENHVQTYQRMLEKDRASANNSKEDHKGLPSALFLNLQHTRSDPEKLFHCDHSQDLLRKVPLLILQSDQYFVPSLFMTPSFNLEITKMFPEKDTVFHHLGRYLFHPSNEAWGLISRFYKAHLAKADERIGLQIRVFRPVSTPPQAVMNLVLNCTIMNKLLPEVVDMQNSVSFASKNQMVKAVLVASLYAEHGEILQTKYMKKATVTGEVIEVYQASHEERQKYNDNKHNMKAWTEMYLLSLSDVLVTTSLSTFGYVAQGLGNLRPWLLYKLTNNETHFPACERDLSLEPCYHTPPKHYCNGKPIKDFASSFPYMRECKDFGFGVKLVNG. 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g11875 619 PANTHER FUCOSYLTRANSFERASE 2-RELATED 40 618 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca3g11875 619 Pfam Xyloglucan fucosyltransferase 137 589 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca3g11875 619 Gene3D - 226 279 - -
Seca3g11875 619 FunFam Galactoside 2-alpha-L-fucosyltransferase 226 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g11875 Seca-Chr3 267233360 267235881 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g11875 147 617 Xyloglucan Fucosyltransferase1 AT2G03220 49.266 2.15e-155 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g11875 K13681 - gmx:100818288 792.727