Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08132 ATGAGCAAGGATGCAAAATTGAGCAAAAAGGATGCAGGTACAGAGTGCAAATACCTTGTATGGACAGCTTCCAATGGCTTAGGGAACAGGATGTTAACCTTGACAGCAGCATTCCTTTATGCTATCCTCACAGACCGCGTTCTACTTGTCAAATTTGGGACTGATATGCTTGGTCTCTTTTGTGAGCCATTTCCTGATTCCTCATGGCTATTGCCCAGGAGTTTTCCTTATTGGAAAGATCAGAAACATATTGAAACGTATGAAAGCATGCTAGTAAGTAACAAGACAAACATTTCACAGGAGCTTTTACCACGATTTCTTATTCTTAATCTACAACACACCCATGATGGTCATAATAACTTTTTTCATTGTGATCATAGCCACGGTCTTCTCCAGAAATTTCCCGTCCTAATTTTGTGGTCGGATCAATATTTTGTCCCTTCTCTATTTATGATTCCACCATTTAGACAAGAACTAAGCAAAATGTTCCCTGAGAAAGATACAGTTTTTCACCATCTGGGACGTTACCTTTTTCATCCATCAAATGAGGCTTGGGAACTTATTAGCAGGTTCTATGAGGCACACTTAGCCAAGGCAAATGAGAAGATTGGCCTGCAGATTAGAGTATTTAATACTCACAGAGCACCACATCAAACCATTGTCAATGAAATTATAGCCTGCACCCTTAAACATAAGCTGCTGCCTGAATTAGACATGCAAAAGTCTGCAAGTTCTCCATTGAAGAAGCAGACATCAAAAGCTATTCTAGTAGCATCTTTATACAAAGAATATGGTGAGAAGCTGAGGGCTATGTATCTGAAAAATACAACTGTTACCAGGGAGGTGATAAAAGTTTATCAGCCAAGTCATGAGGAGCGCCAAAAGTCAAATAATGATATGCACAATATCAAGGCATGGACAGAAATATATTTGCTGAGTTTGTGTGATGCATTGATTACAAGCCCCAAGTCTACTTTTGGGTATGTTGCTCAAAGTCTTGGAGGTTTGAAGCCATGGATTCTGCACAGAGCATATGGGGAAGCCATCCCAAATCCACCTTGTCAACGAGTCAAATCCATGGAGCCTTGTTTCCATTATCCTCCCAAGTATGATTGTAGAGCCAATAGATCAGTTGATTTTACTTCCCTCTTTCATTACATGAAGCATTGTGAAGATGTAACTAGTGGATTGAGGCTGGTTAATGCTAATCGCTAG 1215 0.4 MSKDAKLSKKDAGTECKYLVWTASNGLGNRMLTLTAAFLYAILTDRVLLVKFGTDMLGLFCEPFPDSSWLLPRSFPYWKDQKHIETYESMLVSNKTNISQELLPRFLILNLQHTHDGHNNFFHCDHSHGLLQKFPVLILWSDQYFVPSLFMIPPFRQELSKMFPEKDTVFHHLGRYLFHPSNEAWELISRFYEAHLAKANEKIGLQIRVFNTHRAPHQTIVNEIIACTLKHKLLPELDMQKSASSPLKKQTSKAILVASLYKEYGEKLRAMYLKNTTVTREVIKVYQPSHEERQKSNNDMHNIKAWTEIYLLSLCDALITSPKSTFGYVAQSLGGLKPWILHRAYGEAIPNPPCQRVKSMEPCFHYPPKYDCRANRSVDFTSLFHYMKHCEDVTSGLRLVNANR. 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08132 404 FunFam Galactoside 2-alpha-L-fucosyltransferase 186 340 - -
Seca3g08132 404 Gene3D - 185 338 - -
Seca3g08132 404 PANTHER FUCOSYLTRANSFERASE 2-RELATED 9 401 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca3g08132 404 FunFam Galactoside 2-alpha-L-fucosyltransferase 14 65 - -
Seca3g08132 404 Pfam Xyloglucan fucosyltransferase 6 373 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca3g08132 404 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08132 Seca-Chr3 207479442 207481121 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08132 11 400 Xyloglucan Fucosyltransferase1 AT2G03220 50.886 4.38e-137 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08132 K13681 - gmx:100799776 725.702