Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g08130 ATGTTACAGAAGGACATGGAAAACATTTCAAAGGAGACTTTACCATCAGTTCTATATCTGAAGATACAACACACCAAACATGATCAAGAAAGGTTCTTCCGCTGTGATCATAGTCAAAATCTTCTCCAAAAAGTACCCCTCTTGATTTTGCTCCCTGATCAATATTTTGTTTATTCTTTGTTTATGGTTCCATCCTTTCAGCAAAGAGCTAAGCCAAATGTCCCTGAGAAAGACACTGTTTTCCACCATTTGGGACGTTACCTCTTTCTCCCTTCAAATGAGACTTTTTCTGTTCTGGTAGCATCTTTGTATCTAGACTATGATGAGAACCTTAGGACCATGTATTTGACAAAACCAACTATTACTGGGGAGATTGTAGGAGTTTATCAGCCAAGTCATGAAGAGCATCGAAAGTTCTATGACAACATGAAGGCATTGACTGATATTGATATATATATCTACTGA 465 0.3742 MLQKDMENISKETLPSVLYLKIQHTKHDQERFFRCDHSQNLLQKVPLLILLPDQYFVYSLFMVPSFQQRAKPNVPEKDTVFHHLGRYLFLPSNETFSVLVASLYLDYDENLRTMYLTKPTITGEIVGVYQPSHEEHRKFYDNMKALTDIDIYIY. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g08130 154 Pfam Xyloglucan fucosyltransferase 7 96 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca3g08130 154 Pfam Xyloglucan fucosyltransferase 97 149 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca3g08130 154 PANTHER FUCOSYLTRANSFERASE 2-RELATED 8 95 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g08130 Seca-Chr3 207472700 207473370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g08130 10 149 Xyloglucan Fucosyltransferase1 AT1G14110 35.632 5.16e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g08130 K13681 - gmx:100818288 120.553