Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03769 ATGAATAATAATGTTGGGAAACGAAGTTTGGCAGAACAAAGTCATATGTTTTTTGATGAAAAGAGTCTCAATAGTGGAGTAGTTAATGGAGGGCTAGGCTCTGGATCATCAACAGAAGATGACAAAAGATTTAATAAGATAACCCAAGTGGGAAGCAATGGATTGAGGGGACTGATTCAAATCCATGAGAGCTTGCAGAATTCCCAACAACCACCTCAAGGTCCAGTCATATGCTGGGAGAGATTTCTCCCTGTAAGATCAATAAAAATTCTGCTGGTAGAAGATGATGATTCAACACGCCATGTTGTCCGTGCTCTGTTACGGAATTGTAGTTATGAAGTCACTGCTGTTTCCAATGGTCTTCAAGCATGGAAAGTCCTAGAAGATCCAGGAAATCACATAGATCTTGTCCTAACAGAGGTAGCTATGCCTATTTTATCTGGAATAGGTCTTTTGTGCAAGATCATGAGCCACAAAACTTTAAAGAATATCCCCGTGATTATGATGTCATCTCATGATTCAATGGGTATAGTCTTTAAGTGTTTATCAAAAGGCGCAGTTGATTTTTTAGTGAAACCTATTCGGAGGAATGAACTTAAAAACCTCTGGCAGCATGTTTGGAGAAGATGCCACAGTGTGAGTTGCTTTACATTTCTGTATCAGGCATGTAATGAAACAAATGTCAATGTTGTTTCCTAG 699 0.3906 MNNNVGKRSLAEQSHMFFDEKSLNSGVVNGGLGSGSSTEDDKRFNKITQVGSNGLRGLIQIHESLQNSQQPPQGPVICWERFLPVRSIKILLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPGNHIDLVLTEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFLVKPIRRNELKNLWQHVWRRCHSVSCFTFLYQACNETNVNVVS. 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03769 232 FunFam Two-component response regulator-like PRR37 88 229 - -
Seca3g03769 232 SUPERFAMILY CheY-like 86 213 IPR011006 -
Seca3g03769 232 CDD psREC_PRR 90 193 - -
Seca3g03769 232 Gene3D - 87 215 - -
Seca3g03769 232 SMART REC_2 88 203 IPR001789 GO:0000160
Seca3g03769 232 ProSiteProfiles Response regulatory domain profile. 89 207 IPR001789 GO:0000160
Seca3g03769 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 89 213 IPR045279 GO:0009736
Seca3g03769 232 Pfam Response regulator receiver domain 90 201 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03769 Seca-Chr3 70085378 70088481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03769 35 211 Response Regulator Gene Family AT5G60100 67.797 5.01e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca3g03769 Response_reg 1.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03769 K12129 - gmx:100785796 377.481