Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03124 ATGCTGAAAAGTAAATCAATTACAAATTCCGTGGTGCCTTCTTTTGTCTACCTTCATCTGGCTCATGACTATGATGATCATGATAAGCTTTTCTTCTGTGATGAAGACCAACATTTTCTCCAGAAAGTACCTTTGTTAGTTATGAGAACAGATAATTACTTTATCCCATCTCTATTCTTGATGCCATCTTTTGAGCAGGGACTGAGTGATCTCTTTCCAAACAAAGAGACAGTTTTCCATTTCTTAGGCAGATATCTATTCCACCCCACGAACAGGATCTTAGCTTGTACTTTGAATGAGAATCTCCTGCCTGATGTTGACCAGAAGCAGGGTATTGTTAGTTCATCAGGAAAACCAAAGTCAAAAGCAGTGTTGATGACATCCTTAAGCTCTGGTTATTTTGAAAAAATAAGAGACATGTATTGGGAATATCCTACCGTGACAGGAGAAGTTATTGGCATTTACCAGCCAAGCCATGAGGAATATCAACAAACAGAGAAGCAGATGCATCTTAATGTTGTTCAGCTTCGAGTAGCATCTTAA 543 0.3849 MLKSKSITNSVVPSFVYLHLAHDYDDHDKLFFCDEDQHFLQKVPLLVMRTDNYFIPSLFLMPSFEQGLSDLFPNKETVFHFLGRYLFHPTNRILACTLNENLLPDVDQKQGIVSSSGKPKSKAVLMTSLSSGYFEKIRDMYWEYPTVTGEVIGIYQPSHEEYQQTEKQMHLNVVQLRVAS. 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03124 180 PANTHER FUCOSYLTRANSFERASE 2-RELATED 92 170 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca3g03124 180 Pfam Xyloglucan fucosyltransferase 91 170 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca3g03124 180 Pfam Xyloglucan fucosyltransferase 7 93 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03124 Seca-Chr3 56250042 56250709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03124 1 170 Xyloglucan Fucosyltransferase1 AT2G03220 47.143 1.89e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03124 K13681 - gmx:100803305 267.314