Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00455 ATGGCAGAGGTTGAGGACAGAGATAAGGGTCATAATCATCATCACCGCCATCACATTTCTTCTTCAACAACACCAATGAGCAACAATTTCCCTAGAGATCTGTTGAAGAGGTTCATGGCGGTGAACCATAACCACCACCACTTGCCCATGGCGCCGAAGGTGGAGCAACCTGAAGCAGAGGAAGAACTAGAGCTGAGTCTTGGCCTTTCGATGAATGGTCGATTTGGGGTGGACCCAACAGCGAAGAAGATCAAGAGAACTTCATCAATACCTGAATATGTGAACCAGGTGAGAGAGGAGGACATGGGGTATGTGATGCCAGTGGCTTGTGCACCTTTAATAAGGACTTGTTCTCTCCCAACGGAGACTGAGGAGGAGTGGAGGAAGAGGAAGGAGTTGCAGACGCTGAGGAGAATGGAGGCTAGGAGGAAGCGTTCAGAGAAGCAGAGGAACTTGAAGGCCATGAGGGAAAGGAACCGTTCTTTGTCTGAAGAGGTTGGTTCAGAAGGGGTTGTTGTCGTTGAAGGGAACAGCAATCCAGTGGAGCAAGGTGTAGGTGCTTCGAATGAGGTTACAACCTTGGGAAGAACCTTGTCTTTGACCACTCGTGTTGGTGGACTTGGTTTGAATGGAGAGAAGGAAGAGAAGAAGGGTAGTGGGTTGTTGGCACCTCCATCGCCACCACAGGGTTCTATTGGTTCATCTCAGGGAACTGGGTCTTCAGGAACCTCTGAACCTGAGTGTCAACAAGGTCAAGGAACAACACCAATGGATACTAGAAGCCCTGTTGGTGCCAACTTGTTGCCAGATGGTGAACTGAAATCACCACTCACCTCAGAAAACTCAGGCAAGATTGCTGCAGTAACAATGGGAAATCAGCCTAACAGACATTCACCACCTCAAAACAAAGCCAAAGACATTGTGAAGAACTTTTTGGAAGACATGCCAAGCGTATCTACCAAAGGAGTTGGCCCTAATGGAAAAAGAATAGAAGGTTTTCTTTACCGATATGGGAAAGGTGAGGAAGTGAGGATATTGTGTGTTTGCCATGGCAGTTTTTTCACCCCAGCTGAGTTTGTCAAGCATGCTGGTGGCCCTGATGTGGCTAACCCATTGAAGCATATTGTTGTTAGTCCAAGCTTTTTGTAA 1149 0.4761 MAEVEDRDKGHNHHHRHHISSSTTPMSNNFPRDLLKRFMAVNHNHHHLPMAPKVEQPEAEEELELSLGLSMNGRFGVDPTAKKIKRTSSIPEYVNQVREEDMGYVMPVACAPLIRTCSLPTETEEEWRKRKELQTLRRMEARRKRSEKQRNLKAMRERNRSLSEEVGSEGVVVVEGNSNPVEQGVGASNEVTTLGRTLSLTTRVGGLGLNGEKEEKKGSGLLAPPSPPQGSIGSSQGTGSSGTSEPECQQGQGTTPMDTRSPVGANLLPDGELKSPLTSENSGKIAAVTMGNQPNRHSPPQNKAKDIVKNFLEDMPSVSTKGVGPNGKRIEGFLYRYGKGEEVRILCVCHGSFFTPAEFVKHAGGPDVANPLKHIVVSPSFL. 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00455 382 Pfam Tify domain binding domain 343 377 IPR032308 -
Seca2g00455 382 Coils Coil 129 165 - -
Seca2g00455 382 PANTHER AFP HOMOLOG 2 30 381 IPR031307 GO:0007165
Seca2g00455 382 MobiDBLite consensus disorder prediction 139 164 - -
Seca2g00455 382 Pfam Ethylene-responsive binding factor-associated repression 59 92 IPR012463 -
Seca2g00455 382 MobiDBLite consensus disorder prediction 1 30 - -
Seca2g00455 382 Pfam Putative nuclear localisation signal 113 212 IPR032310 -
Seca2g00455 382 MobiDBLite consensus disorder prediction 228 261 - -
Seca2g00455 382 MobiDBLite consensus disorder prediction 204 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00455 Seca-Chr2 6475192 6480423 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00455 2 6475192 6480423 Seca2g00455 2 6475192 6480423 ECH