Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca2g00318 ATGTTTACGCCGCAGAGGGTGTGGTCGGGTTGGTCCCTCACGCCCAGCAAGAGCGGGACTCGGGCTGGAACCGGGTCGGGTTCGAACAGAGAGATGGGTCCGAATTCAGGTGATGGGACTGGTGCGAAAGGAAAAGGTGTCGCTGTTGTTGAGAATGGGGGGAACTTGGATCGGGAGGTTTTAGTTGAGAGAGTTTCAAGCCTCGAGAAGGAGCTTTATGAGTACCAATTCAATATGGGGCTTCTCTTGATTGAGAAGAAAGAATGGAACTCTAAGTATACTGAGCTGAGTCAAAATTTAGTGGAAGTGAAGGATGCTCTAGAACGAGAAAAAGCAGCTCATTTAATTGCTCTGTCTGAGGCAGAGAAGCGAGAAGAGAATCTGAGGAAAGCCTTGGGTGTTGAGAAGGAGTGCGTGCTTGATCTTGAGAAGGCTCTGCGAGAAATGCGGTCAGAGAATGCAAAAATTAAATTTACAGCAGATTCAAAGTTGGCTGAAGCAAATGCTTTAATAGCTAGCATTGAAGAGAAATCTTTAGAAGTAGAAGCCAAGTTACGCTCTGCTGATGCCAAATTTGCAGAAATCAGCAGAAAAAGTTCCGAGATTGATAGGAAATCACAAGATCTGGAGGCTCAGGAATCCGCACTTAGAAGGGAGCGCTTATCCTTCATTGCAGAGCAAGAAGCACATGAGAGTACTTTGTCAAAGCAGAGAGAGGACTTGCGAGAATGGGAGAAGAAACTACAGGAGGGAGAAGAGAGGCTAGCCAAGGGTCAAAGGATTCTCAATGAAAGAGAGCAGAGGGCTAATGAGAATGACAGAATATGCAGGCAGAAAGAGAAGGACCTTGAAGAGGCACAGAAGAACATTGATATAACAAATGAAACATTGAGAAGCAAAGAAGATGATGTGAACATCAGGATTGCAAATATTACTCTCAAAGAGAAGGAATGTGATTCTATGAGAATGAACTTGGATCTCAAAGAGAAGGAGTTATCTGCATGGGAGGAAAAGCTCAATGCTAGAGAAAAAGTTGAGATTCAGAAGCTTGTCGATGAACACAATGCTATTCTTGATGTGAAGAAGCAGGAGTTTGAGGTGGAATTGGATGAAAAAAGAAAATCCTTTGAAGATGGATTGAAAAATAGATTGGTGGAAGTGGAAAAGAAAGAAGATGAAATCAATCACATGGAGGACAAGGTTGCAAAACGGGAGCAGGCCCTGGAAAAGAAAGCAGAGAAGCTTAAGGAGAAAGAGAAAGAGTATGATCTAAAAGTCAAAGCTTTGAAGGAAAGGGAGAAGTCTGTTAAGTCTGAGGAGAAAAACTTGGAGATGGAGAAAAGGCAATTGGAAAGTGAGAGAGAGGAACTGCTCAGACTTAAGGCTGAAGTTGAGAAGACAAGGGCTAACAATGAAGAAGAGTTGTTGAGGATAAATGAAGAGACTAATCGTCTTAAAGTGACTGAGGAGGAGAGGTCTGAATATCTACGCTTGCAGTCACAGTTGAAGCATGAAATTGATCAGTACAGGATGCAGAAAGAACTGCTTCTGAAGGAAACTGATGACTTGAGGCAGCAAAAAGAGACTTTTGAAAGAGAATGGGATGAGCTGGATCTGAAAAGAGCAGATGTTGAGAAAGAGCTGAAAAATGTGGTTCAACAGAAGGAAGAACTATTAAAACTACAACAATTTGAAGAAGAAAAGTTAAAGAATGAGAAGCAGGCCACACAGGATTATGTACAAAGGGAGTTGGAAACTCTTAAGTTGGCTAAAGAGTCTTTTGCAGCAGAAATGGATTTAGAGAAGTCAAGCCTAGCCGAAAAAGCTCAAAGTGAGAAAAACCAAATGCTTCTGGATTTTGAGTTGCGGAAAAAAGAACTTGAAGCTGATATGCAGAATCAATTGGAGCAGAAGGAAAAAGACTTGCTTGAGAGGAGGAAGCTATTTGAAGAGAAAAGAGAGAGTGAATTGAACAATATTAATTTTTTGAGAGAAGTAGCTAATAGAGAAATGGAGGAAATGAAACTTCAAAGAAGTAAATTAGAGAGGGAGAAACAAGAGACTGATGAGAGTAAAAAACATCTTGAAAGGCAAAGGACGGAAATGCAAGAGGATATAGATGTGCTTGTTGACCTTAATAGGAAGCTGAAAAATCAGCGGGAACAATTCATTATGGAGAGACGACGCTTTATTGAGTTTGTTGAGAAACTTAGGAGTTGCCAGAACTGTTGGGAAATGATTTCGGAATTTGTGCTGTCTGATTTACAATCCTCTGCTGACATTGAGAATTTAGAGGTGCCTTCTCTTCCAAAAGTGGCAGGTGATATAATACAGGGTGGTTCTGATGTGAATCTGGCTTTTTCTAGGCAAAATACTGGAGTGTCTCCTGCAACTGATCCAAAGTCCCCAGTTTCTGGTGGCACTCTCTCTTTTCTACGGAAATGCAAATCTTTTTTCAAGTCCCCTATTAGAAAGAATGAATCTGAAGATGTTGGTAGTTTAAGGGATGTGACTAATTTGTCTGCTGAGAAAGCTGAAGATTCACCGGGAAGAATTACTGGCACTGAAAATGAAGCAGGGTTGTTGTTTGCTGTGGCAAATGATTCTTTTGATGCTCGGAAGGCACAATCTGGCAATGATATCACAGCAGAGCTTGAAGCTGACCATGATCCATCAATTGACAACCAGAGTAACATTGACAGTAAGGCACCAGAAGATTTGCAGCCTCCTGATTCAAAGGTTGGGCAGCAGAAACCTCGCAAGGGAGGGGGAAGGGCCAGAGTAAAGCGTACAAACACTGTGAAAACTGTTCTCAAAGAGGCTAAGGCTATACTTGGGGAATCAAAAGCTGCTGAAGCAGTACCTGGGGAATCTGTGGATGATCGTGAGACTGAGTTTCCAAATGGGAACGCTGAGGATTCTGCTGATGTGAATTCTGAAAGTCAGAAACCATCCAATAGAAGAAAGCCAGTGACTGTACGAAAGCGAAATCGGGTTCAAACATCTCAAATGACTGCTAGTGGGCATGATGGTGATGCTAGTGAAGGACATTCTGATAGTTTAGTACCAGGGCAACGCAAAAGGAGGCGACAGAAGGCTGCTGCTCCTCCTGTACAAACTGCTGGTGAAACAAGATATAATTTGAGGCGACCCAAAACTGGAGCAACGACTTCATCTGTTAGAGCCTTGTCTGGTGGCGGCAAAGAAAGTGAGGGAGAGGTTGATCGAGTTAAAGATACAGAAAGAAATGTCTACTCTAAAACATCTCATTCACATTCAGTTGGTATTACTAATGAAAATGGTGGAAGCATAGATCTTGAGCAGTCTGAGAAAGTAGTGGAGACCCAAGATGATTATGGGGATACCACAAGGACTTTTGCCAACAATATGGCCTTGAGTGAGGAGGTGAATGGAACAGCGGATGATGTGGAGGAGCATGATGCTGAGTACAGGAGTGAATCCCACGGGGAAGATGGTGGTGGAGTTGAGGATGAGGATGATGAAGATTACCAACATCCTGGGGAAGCTTCAATAGGGAAGAAGCTATGGAACTTTTTTACAACATAA 3567 0.4253 MFTPQRVWSGWSLTPSKSGTRAGTGSGSNREMGPNSGDGTGAKGKGVAVVENGGNLDREVLVERVSSLEKELYEYQFNMGLLLIEKKEWNSKYTELSQNLVEVKDALEREKAAHLIALSEAEKREENLRKALGVEKECVLDLEKALREMRSENAKIKFTADSKLAEANALIASIEEKSLEVEAKLRSADAKFAEISRKSSEIDRKSQDLEAQESALRRERLSFIAEQEAHESTLSKQREDLREWEKKLQEGEERLAKGQRILNEREQRANENDRICRQKEKDLEEAQKNIDITNETLRSKEDDVNIRIANITLKEKECDSMRMNLDLKEKELSAWEEKLNAREKVEIQKLVDEHNAILDVKKQEFEVELDEKRKSFEDGLKNRLVEVEKKEDEINHMEDKVAKREQALEKKAEKLKEKEKEYDLKVKALKEREKSVKSEEKNLEMEKRQLESEREELLRLKAEVEKTRANNEEELLRINEETNRLKVTEEERSEYLRLQSQLKHEIDQYRMQKELLLKETDDLRQQKETFEREWDELDLKRADVEKELKNVVQQKEELLKLQQFEEEKLKNEKQATQDYVQRELETLKLAKESFAAEMDLEKSSLAEKAQSEKNQMLLDFELRKKELEADMQNQLEQKEKDLLERRKLFEEKRESELNNINFLREVANREMEEMKLQRSKLEREKQETDESKKHLERQRTEMQEDIDVLVDLNRKLKNQREQFIMERRRFIEFVEKLRSCQNCWEMISEFVLSDLQSSADIENLEVPSLPKVAGDIIQGGSDVNLAFSRQNTGVSPATDPKSPVSGGTLSFLRKCKSFFKSPIRKNESEDVGSLRDVTNLSAEKAEDSPGRITGTENEAGLLFAVANDSFDARKAQSGNDITAELEADHDPSIDNQSNIDSKAPEDLQPPDSKVGQQKPRKGGGRARVKRTNTVKTVLKEAKAILGESKAAEAVPGESVDDRETEFPNGNAEDSADVNSESQKPSNRRKPVTVRKRNRVQTSQMTASGHDGDASEGHSDSLVPGQRKRRRQKAAAPPVQTAGETRYNLRRPKTGATTSSVRALSGGGKESEGEVDRVKDTERNVYSKTSHSHSVGITNENGGSIDLEQSEKVVETQDDYGDTTRTFANNMALSEEVNGTADDVEEHDAEYRSESHGEDGGGVEDEDDEDYQHPGEASIGKKLWNFFTT. 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca2g00318 1188 Coils Coil 269 303 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 1119 1135 - -
Seca2g00318 1188 Coils Coil 86 124 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 971 986 - -
Seca2g00318 1188 Coils Coil 617 652 - -
Seca2g00318 1188 Coils Coil 318 345 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 1087 1105 - -
Seca2g00318 1188 Coils Coil 664 722 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 954 969 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 1143 1158 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 884 1176 - -
Seca2g00318 1188 PANTHER PROTEIN CROWDED NUCLEI 4 9 1188 IPR040418 GO:0005634|GO:0006997
Seca2g00318 1188 MobiDBLite consensus disorder prediction 677 697 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 1068 1086 - -
Seca2g00318 1188 Coils Coil 227 261 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 1012 1026 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 1 48 - -
Seca2g00318 1188 Coils Coil 380 575 - -
Seca2g00318 1188 Coils Coil 164 191 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 1050 1064 - -
Seca2g00318 1188 SUPERFAMILY Tropomyosin 171 342 - -
Seca2g00318 1188 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca2g00318 Seca-Chr2 4511996 4519440 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca2g00318 2 4511996 4519440 Seca2g00318 2 4511996 4519440 ECH