Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g06154 ATGGTGCTGATCCATGAAGAAATAGATCCCTTTGAACAAGAAGAAGAAGAGGAAATCGATTATGACCAGCTTAAGAAGCGCATGTGGAGGGATCGAATCCTGCTTCAGAAGCTAAAGGAAAAAGGCCAGAAAGATGAGCCAGAACAAGAAGCAAAACAAGAAGCATCAAGGAGGAAGAAGATGTCAAGAGCACAAGACTCAATCCTTAAGCACATGATGAAGGTCATGGAAGTTTGCAATGCTCAAGGTTTCGTCTATGGAATTGTTCCAGAGAAAGGAAAGCCAGTCACTGGTTCTTCTGAAAGCCTTCGCCAGTGGTGGAAAGAAGATGTCAAATTCAGTAAAAATGCCCCTGCTGCTATTGGCAAGTACTTGCCACTCCTTCAAAGAGATGATGATGATGAGGTTGATCCAATTTCCTATATGCATCTCCTTAATGAATTGCAAGATACTACATTGGGTTCTCTTCTCTCTGCTCTCATGCAACATTGTATTCCACCCCAAAGAAGATTCCCTCTTGAAAGAGGATTGGCTCCACCTTGGTGGCCTAGGGGAACAGAACATTGGTGGGGTGAACAAGGACTTTTGGCCCAAGAACAAGGTCCACCTCCTTATAAAAAACCTCATGACCTTAAAAAGGCTTGGAAAGTTTCTGTTTTGACTGCAGTCATCAAACACATGTCTCCTGATTTGGATAAAGTCAAAAGATTGGTGATTCAGTCCAAGACTTTGCAAGATAAGATGACTGCCAGAGATATTGCAACTTGGTCACAAGTGATGAACCAAGAAGAAGCTTTGTTGCATCAACTCACTGATAAGTGCCTCAAGATATCTCCAGCTGAGGAGGAGGATGAAAACCAAGAAGAAGGTGAAGGCTCTAGTACTACTACCCATGTTTTCAATGAAGGGAAGCATGTTTCTGAGATAAAAGACAATTCCAATTTATGTGGCAGCAGTGAGAAGAGGAAGAGTTTGTTTGATTTGGATGATGCTGTTTTTGATAAGCTATATGGTTGTCAATATGAGCAGTGTCCACAAAGTGAACTGTGTATGGGATTTCAGGACAAAAGCGCCAGGATGAATCATGAATCCCTTTGTGCTTACCGTACTGAACAAAGCCATGTTCCTTTCCATGATTATATGTCCAATGACACACGTGTAGATGATTGGATGAACATGGAGGTAACGAGGACTAATCAGAATCAGAATGACCTTGTTGGAGGACAAGTGATGAATGAGATGGGAGGGATTCCGGGTAGGACAGTAGAAGATTATGGAGGCTTTTGGCTAAATGGCATTGAAGATCTTGAATTGCATTTGGCACAAGAGATCCCACAAGGCCAAGAAGCAACCTCAATTTGGGACTTAGCATACAAATAA 1380 0.4217 MVLIHEEIDPFEQEEEEEIDYDQLKKRMWRDRILLQKLKEKGQKDEPEQEAKQEASRRKKMSRAQDSILKHMMKVMEVCNAQGFVYGIVPEKGKPVTGSSESLRQWWKEDVKFSKNAPAAIGKYLPLLQRDDDDEVDPISYMHLLNELQDTTLGSLLSALMQHCIPPQRRFPLERGLAPPWWPRGTEHWWGEQGLLAQEQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDLDKVKRLVIQSKTLQDKMTARDIATWSQVMNQEEALLHQLTDKCLKISPAEEEDENQEEGEGSSTTTHVFNEGKHVSEIKDNSNLCGSSEKRKSLFDLDDAVFDKLYGCQYEQCPQSELCMGFQDKSARMNHESLCAYRTEQSHVPFHDYMSNDTRVDDWMNMEVTRTNQNQNDLVGGQVMNEMGGIPGRTVEDYGGFWLNGIEDLELHLAQEIPQGQEATSIWDLAYK. 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g06154 459 FunFam Ethylene insensitive 3-like 1 136 274 - -
Seca12g06154 459 Gene3D - 135 274 IPR023278 GO:0003700|GO:0005634
Seca12g06154 459 Gene3D - 50 125 IPR023278 GO:0003700|GO:0005634
Seca12g06154 459 Pfam Ethylene insensitive 3 23 264 IPR047091 GO:0003700
Seca12g06154 459 MobiDBLite consensus disorder prediction 38 63 - -
Seca12g06154 459 SUPERFAMILY DNA-binding domain of EIN3-like 142 267 IPR023278 GO:0003700|GO:0005634
Seca12g06154 459 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 12 403 IPR006957 GO:0003700|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g06154 Seca-Chr12 153454907 153456286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g06154 17 370 EIL Transcription Factor Family AT5G65100 49.640 1.40e-128 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Seca12g06154 EIN3 1.1e-113 No_clan