Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05517 ATGTATTATGATGACTTGCCAATCTGGGGATTTATTGGAACGGTTGACAAAGAGGGAAAAACTGACCCTAGTGAGTACAAGTATTTTCTTTACAAGCATATTCAGTTTGATGTTATGTACAACAAAGATCGGGTGATTGAAATCAGTGCCAGAATGGATCCTCATTCTGTGGTGGACCTGACTGAGGACAAGGACATTGATGTTGAGTTTATGTATACTGTAAAATGGAAGGAAACAGATACTCCTTTTGAGAAGAGAATGGAAAAATACTCTCAGTCTTCTTCTTTGCCACATCACTTGGAGATTCACTGGTTCTCCATCATAAACTCCTGTGTAACAGTTCTTCTTTTGACTGGGTTTCTGGCAACCATTCTCATGCGTGTTTTGAAGAATGACTTTATGAAATATGCTCAAGATGAGGAAGCTGCTGATGATCAAGAGGAGACAGGATGGAAGTACATTCATGGTGATGTTTTCCGGTTTCCTAAGTACAAGTCCTTGTTTGCAGCAGCCCTTGGTTCTGGAACTCAACTATTCACTCTTACGATCTTCATTTTTATGCTTGCACTGGTTGGTGTATTTTATCCCTATAACCGAGGAGCTTTATTTACTGCACTGGTGGTCATTTATGCTCTCACATCTGGCATTGCTGGCTACACTGCTACTTCCTTCTATATTCAACTTGAAGGGTCTAATTGGGTTAGAAACTTATTGCTGACAGGATGCCTCTTTTGTGGCCCTCTTTTCCTTATGTTCTGCTTCCTTAACACAGTTGCAATTGCTTATAGTGCAACTGCAGCTCTTCCATTTGGCACAATCTTGGTGATAGTCCTAATATGGACATTGGTAACTTCACCATTACTTGTGTTGGGTGGTATTGCAGGTAAAAACAGCAAAACTGAGTTTCAAGCACCTGTCCGCACTACAAAATATCCACGAGAGATTCCACCTCTGCCGTGGTACAGGAGTACCATTCCCCAGATGGCCATGGCAGGATTTCTCCCTTTCAGCGCCATCTACATAGAACTGTACTACATTTTTGCCAGTGTCTGGGGCCACAGAATTTATACTATCTACAGCATACTGTTCATTGTCTTCATTATTCTGTTGATTGTCACTGCTTTCATCACTGTGGCTTTGACATACTTTCAACTTGCTGCTGAAGATCATGAATGGTGGTGGAGGTCTTTTCTGTGTGGTGGATCAACTGGATTGTTCATCTATGGCTATTGCTTGTATTATTACTATGCTCGATCAGATATGTCTGGTTTTATGCAAACATCGTTCTTCTTCGGTTACATGGCTTGCATCTGCTATGGCTTCTTCCTCATGCTTGGTAGCGTAGGTTTCCGTGCCTCCCTGCTCTTTGTCCGTCACATATACAGGTCCATCAAGTGTGAGTAG 1404 0.4188 MYYDDLPIWGFIGTVDKEGKTDPSEYKYFLYKHIQFDVMYNKDRVIEISARMDPHSVVDLTEDKDIDVEFMYTVKWKETDTPFEKRMEKYSQSSSLPHHLEIHWFSIINSCVTVLLLTGFLATILMRVLKNDFMKYAQDEEAADDQEETGWKYIHGDVFRFPKYKSLFAAALGSGTQLFTLTIFIFMLALVGVFYPYNRGALFTALVVIYALTSGIAGYTATSFYIQLEGSNWVRNLLLTGCLFCGPLFLMFCFLNTVAIAYSATAALPFGTILVIVLIWTLVTSPLLVLGGIAGKNSKTEFQAPVRTTKYPREIPPLPWYRSTIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIVFIILLIVTAFITVALTYFQLAAEDHEWWWRSFLCGGSTGLFIYGYCLYYYYARSDMSGFMQTSFFFGYMACICYGFFLMLGSVGFRASLLFVRHIYRSIKCE. 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05517 467 Pfam Endomembrane protein 70 1 424 IPR004240 GO:0016020
Seca12g05517 467 SUPERFAMILY MFS general substrate transporter 100 284 IPR036259 -
Seca12g05517 467 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 1 467 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05517 Seca-Chr12 146222380 146229521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g05517 1 467 Miscellaneous Gene Families AT2G01970 93.148 0.0 887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05517 12 146222380 146229521 Seca12g05517 12 146222380 146229521 ECH