Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g05429 ATGAGCAGCAGTGGTAGAGATATGAATGTGATGCCAGCATGGTTAAAGAAGCTTATGGCTGAGACATTCTTTAGTAGTTGTGGGGTCCACCAGGATCTCAAGAAGAATAAGGAGAACATCTTTTGCTTACAATGTTGCCGTAGCATCTGCTCCCACTGCCTCCCTTCTCATGGCTCTCACCCTCTCCTTCAGGTGAGAAAGTGTGTTTACCATGATGTGATTGAATTGAATGATTTGGAAAAGCTCATCGATTGTTCCAATATTCAGCTATATACCAACAATGGTGCCAGAGTGGTATTCTTAAACCAGAGGCCACAGTCAAAGCCATGTAGAGGCATTGCCAACACTCGCTTTTGTTGTCACAGGACTCTTCAGGGGCCCATGGACTTCTGTTCTCTCTCATGCAAGGTTGATTACATAGTACAGGAATATGGGGGTAAAGAGTTGTCTAAAATGTTACGTTTCAATCAACATAAAGATACCCAAATTGCCTCCACTTCTTCACGCTCTGCTGTCAACAGCAACAGTTCTAAGAGAAAGGGTATTCCCCGGAGAGCTCCTCTTTCCTAG 570 0.4421 MSSSGRDMNVMPAWLKKLMAETFFSSCGVHQDLKKNKENIFCLQCCRSICSHCLPSHGSHPLLQVRKCVYHDVIELNDLEKLIDCSNIQLYTNNGARVVFLNQRPQSKPCRGIANTRFCCHRTLQGPMDFCSLSCKVDYIVQEYGGKELSKMLRFNQHKDTQIASTSSRSAVNSNSSKRKGIPRRAPLS. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g05429 189 MobiDBLite consensus disorder prediction 161 189 - -
Seca12g05429 189 MobiDBLite consensus disorder prediction 161 180 - -
Seca12g05429 189 Pfam PLATZ transcription factor 66 137 IPR006734 -
Seca12g05429 189 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 9 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g05429 Seca-Chr12 144968424 144970430 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca12g05429 PLATZ 3.4e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g05429 12 144968424 144970430 Seca12g05429 12 144968424 144970430 ECH