Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04489 ATGGGTCTCGTGTGGAATCAACGAGGCTCGAGAACAGAAACGACCCTAGATGGTTTCCCAGTTTCCGTTTCTACAGGTGCAGTGGCTCCCAAGAAGAAATGGTCTAATCTAATGCCTCTCTTTGTGGCCCTTGTGGTCATTGCCGAGATCGCGTTTCTGGGTAGGTTGGATATGGCGAAGAACGCAGCCATGGTGGCTGACTTGTTCTACCGGTCTCGTATGGTGGTAGAACGTGATGATTTGGGGTTAGATATGGTGGTTGCTGATCAGAATTCGGAACCAGATAGCTGTGAGAAATGGTTGGAGAGGGAGGATGCTGTCACATATTCAAGAGACTTTTCCAAGGAACCTATTTTTGTTTCTGGAGCTGACCAGGAGTGGAATTCGTGTTCGGTGGGATGTAAATTTGGGTTTAATGGGGACAAGAGACCTGATGCTGCATTTGGGTTACCCCAGCAAGGTGGGACAGCTAGTGTTCTGCGATCAATGGAATCAGCACAATACTATGCAGAGAACAATATTGCCATGGCACGACGGAGGGGATATAAAGTTGTAATGACAACCAGTCTATCATCTGATGTTCCTGTCGGATATTTTTCATGGGCTGAGTATGACATCATGGCACCAATAAAGCCGAAAACAGAAGCTGCTCTTGCAGCTGCATTCATTTCCAATTGTGGTGCTCGAAATTTCCGGTTGCAAGCTCTTGAAGCCCTTGAAAAAGCAAACATCAAAATTGATTCTTATGGTGGTTGTCATAGGAATCGTGATGGAAGAGTCGACAAAGTTGAAACCCTGAAGCGTTACAAATTTAGCCTAGCATTTGAAAATTCTAATGAGGAGGATTATGTAACTGAAAAATTCTTCCAATCCCTTGTTGCTGGAACTGTCCCTGTGGTTGTTGGTGCTCCAAATATTCTAGATTTCGCTCCTTCTCCCAGTTCAATTTTACATATTAAAGAGTTAGAAGATGCTGAGTCCGTTGCCAAGACAATGAAATACCTAGCAGAAAACCCTGAAGCATATAATCAATCGTTGAGGTGGAAGTATGAGGGCCCATCTGATTCCTTCAAGGCCCTTGTGGATATGGCAGCTGTACATTCATCTTGCCGCCTTTGCATCCACTTGGCCACAATGAGTAGAGAGAAGGAAGAAAAGAGCCCAGACTTCAAGAAACGCCCTTGCAAGTGCACTCGAGGATCAGAAACTGTATATCATATCTATGTGAGAGAAAGGGGAAGATTTGAGATGGAGTCCATTTACTTGAGGTCTAGCAATTTAACTCTTGAGGCCTTAAAGTCTGCTGTTCATTTGAAGTTCACATCCCTGAAACATGTACCTGTATGGAAGCCAGAAAGACCTGAAATGCTAAGAGGGGGCAATGAATTAAAAATTTACAAAATATACCCTGTTGGCTTGACACAGAGAGAAGCTCTTTATACCTTCAACTTCAATGGGGATGTGGATTTCAGGAGTCACTTGGAAAACAATCCCTGTGCTAAGTTTGAAGTCGTTTTTGTGTAG 1524 0.439 MGLVWNQRGSRTETTLDGFPVSVSTGAVAPKKKWSNLMPLFVALVVIAEIAFLGRLDMAKNAAMVADLFYRSRMVVERDDLGLDMVVADQNSEPDSCEKWLEREDAVTYSRDFSKEPIFVSGADQEWNSCSVGCKFGFNGDKRPDAAFGLPQQGGTASVLRSMESAQYYAENNIAMARRRGYKVVMTTSLSSDVPVGYFSWAEYDIMAPIKPKTEAALAAAFISNCGARNFRLQALEALEKANIKIDSYGGCHRNRDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTVPVVVGAPNILDFAPSPSSILHIKELEDAESVAKTMKYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATMSREKEEKSPDFKKRPCKCTRGSETVYHIYVRERGRFEMESIYLRSSNLTLEALKSAVHLKFTSLKHVPVWKPERPEMLRGGNELKIYKIYPVGLTQREALYTFNFNGDVDFRSHLENNPCAKFEVVFV. 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04489 507 Gene3D - 161 356 IPR038577 -
Seca12g04489 507 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 102 382 - -
Seca12g04489 507 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 44 456 IPR001503 GO:0006486|GO:0008417|GO:0016020
Seca12g04489 507 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 217 383 IPR001503 GO:0006486|GO:0008417|GO:0016020
Seca12g04489 507 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 164 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04489 Seca-Chr12 122182129 122188576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04489 1 507 Xyloglucan Fucosyltransferase1 AT1G49710 67.568 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04489 K00753 - gmx:100776065 866.3