Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g04092 ATGGTTTTAGGCCAACGACACATTTCCACGGTCATGTTTCCTAATCATAGACCCCTTCTGCGACCATTACGATCCGCAGCTACAAAATCTGGTCATCGTACTATGAGTTTTGCCAAAATCTTTGCTCTGTGCTTCGTAGCTGTCCCACTCGTCGTCACACTCAGGCTTGCTCTCTCCTACCCTTCCTCCGATCCAAACCCGGGTTTTGCTCAGGCACGAATTTTGGACAAAGTGTCTCGGACTGATACCTCAGTGGCTGAAAATGGTTCAGAAGATGGTCATTTTGAATCGTCTAAAATGTCAAAAGACAAATTACTTGGTGGACTCCTTGCTCCTGGGTTTGATGAAGGCTCTTGTTTGAGCAGGTATGAGTCCAGTTTATATCGCAAAACCTCACCTCATAAACCTTCTGCTTATCTCCTATCCAAGCTTCGAAGTTATGAGGAACTCCACAAACGTTGTGGACCCAATACTGAATCTTACAACAAGACTTTAAAACAACTTCAGTCAGGTCAAATAAGTAGTTCTACAGGGTCAGAGTGTAAATATGTTGTATGGATATCTATTAGTGGCTTGGGGAACAAAATACTAACAGTGGCATCAGCATTTCTGTATGCTATCCTAACAAATAGAGTCCTGCTTGTTGACCCAGGAAAGGACATGCCTGATCTTTTTTGTGAGCCATTTCCAGAGAAGTCATGGTTACTGCCCACTGATTTTCCACTTAAAAGTAAGTTTGATATGTATGAGCAAAAGTCACCTGATTCTTATGGAAACATGCTCAAAAATAACATCTTAAACACTTCGGCTGAATCGTTGCCCTCTTTTTTATATTTTCATTTGGTTCATGATTATGGAGAACATGATAAACTTTTCTTCTGTGATCAAGACCAAATGTTCTTTAGTAAAGTTCCCTGGTTAATTATGAAAAGTGACAACTACTTTGTTCCATCCCTTTTCTTGATCCCTTCTTTTGAGCAAGAACTTAGCAGATTGTTCCCCAACAAATCAACTGTTTTCCACCACCTGGGTCGGTATCTCTTTCACCCCTCTAACCAAGTGTGGGGCCTAATCACAAGGTACTATCAGGCTTACTTAGCCAAGGCAGATGAGAGAATTGGCATACAAATCAGAGTGTTTGAATCTGGAACTGGTCCATTTCAATATGTGATGGATCAAATTTTGGCATGTACTTTCAAGCAAAAGGTGCTGCCTGAAGTTGATAAGCAAGAAACTGTTGTCCCTCCATCAGGAAAGCCACACTTAAAAGCTGTTTTGATGACATCCTTGAGTTTTGGGTACTTTGAGAATTTAAGAAATATGTATTGGGAACAACCCACTGTCACTGGGGATATAATTGGGGTTTATCAGCCAAGCCATGAAGAATTTCAACAGACAGAGAAGCAATTACACAACAGGAAGGCATGGGCAGAAATGTATCTCCTAAGTTTGACTGATGTGTTAGTCACAAGTGCATGGTCAACATTTGGCTATGTGGCTCAAGGTCTTGGAGGTTTGAAGCCATGGATTCTTTATAAACCAGACAATCATACAGCACCAGATCCACCTTGTCGTCGAGTAATGTCAATGGAACCGTGTTTTCATGCTCCCCCATTTTATGATTGCAAGGCAAAGACTGGAATTGATACGGGTAAACTTGTACCTCATGTAAGGCATTGTGAAGATATGAGTTGGGGCCTTAAGCTAGTTGATAGTCATGATGATTTATAG 1731 0.4119 MVLGQRHISTVMFPNHRPLLRPLRSAATKSGHRTMSFAKIFALCFVAVPLVVTLRLALSYPSSDPNPGFAQARILDKVSRTDTSVAENGSEDGHFESSKMSKDKLLGGLLAPGFDEGSCLSRYESSLYRKTSPHKPSAYLLSKLRSYEELHKRCGPNTESYNKTLKQLQSGQISSSTGSECKYVVWISISGLGNKILTVASAFLYAILTNRVLLVDPGKDMPDLFCEPFPEKSWLLPTDFPLKSKFDMYEQKSPDSYGNMLKNNILNTSAESLPSFLYFHLVHDYGEHDKLFFCDQDQMFFSKVPWLIMKSDNYFVPSLFLIPSFEQELSRLFPNKSTVFHHLGRYLFHPSNQVWGLITRYYQAYLAKADERIGIQIRVFESGTGPFQYVMDQILACTFKQKVLPEVDKQETVVPPSGKPHLKAVLMTSLSFGYFENLRNMYWEQPTVTGDIIGVYQPSHEEFQQTEKQLHNRKAWAEMYLLSLTDVLVTSAWSTFGYVAQGLGGLKPWILYKPDNHTAPDPPCRRVMSMEPCFHAPPFYDCKAKTGIDTGKLVPHVRHCEDMSWGLKLVDSHDDL. 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g04092 576 FunFam Galactoside 2-alpha-L-fucosyltransferase 179 230 - -
Seca12g04092 576 Gene3D - 178 227 - -
Seca12g04092 576 Pfam Xyloglucan fucosyltransferase 98 543 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca12g04092 576 PANTHER FUCOSYLTRANSFERASE 2-RELATED 44 571 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g04092 Seca-Chr12 110256544 110259430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g04092 34 570 Xyloglucan Fucosyltransferase1 AT2G03220 64.630 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g04092 K13681 - cave:132177716 867.455