Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01677 ATGGCTTCTTCTGTGGTATCCATCTCTTCTACAATCACACTAATTACCATCTGCATACTCTCCTCAGTTTTATCAATTTCTTCCACAGCAGAAACTTTGGAGGAAAGGACAAGGCCCTTCAAGAAGGTTTATGCCTTTGGGGACTCCTTTACTGACACTGGCAACACCAAGAATGCTGAAGGTCCAAGTGGGTTTGGACATGTATCAAACTCTCCATATGGCAGCACCTTCTTTAACCATTCCACCAACAGGTACTCTGATGGTAGGCTTGTGATAGACTTTGTAGCTGAAGCACTATCATTGCCATATCTTCCCCCTTACCGTCACAGCAAAGGCAATGACACTTCTGGGGTGAACTTTGCTGTTGCTGGTTCTACAGCAATAAACCATGAGTTCTTTGTCAGGAACAACCTTTCCCTTGACATCACTCCTCAGTCCATCCAAACCCAGATGATATGGTTTAACAGGTACCTAGAGAGCCAAGGATGTCAAGGAGTGGAATCAAAATGCAAAGATTTTGATGAGACTCTATTTTGGTTTGGTGAGATTGGAGTCAATGACTATGCCTACACTCTTGGATCTTCAGTCTCAGATGACACCATAAGGAAGCTTGCAGTTAGCAGTGTCTCAGGAGTTTTGCAGGCATTGCTTCAGAAGGGTGCTAAGTACCTAGTTGTGCAAGGTTTGCCACTAACTGGTTGCCTGCCACTGGCTATGTATCTGGCTCCTCAAGATGACAGAGATGATATTGGATGTGTGAAAAGTGTCAACAACCAAAGCTACACCCACAACCTTGTGCTGCAAGCCAAATTACAGGAATTCAGGAAGCAGTACCCTCATGCTGTTATAGTGTATGCTGATTACTGGAATGCCTACCGTACTGTCATGAAGAATCCAGGTAAATATGGATTCAAAGAGGTATTCAGAGTCTGCTGTGGATCAGGAGAACCACCTTACAACTTCAGTGTGTTTGCCACATGTGGCACACCTAATGCAACGGTTTGCACAAGCCCTTCTCAGTACATTAATTGGGATGGTGTTCACCTAACAGAGGCCATGTATAAAGTTGTTTCTGATATGTTTCTGCAAGGAAACTTCAGCCAACCTCCATTTAATTTTTTACTGGAAAAGAAAGAGAGGCAGGGATGA 1149 0.4386 MASSVVSISSTITLITICILSSVLSISSTAETLEERTRPFKKVYAFGDSFTDTGNTKNAEGPSGFGHVSNSPYGSTFFNHSTNRYSDGRLVIDFVAEALSLPYLPPYRHSKGNDTSGVNFAVAGSTAINHEFFVRNNLSLDITPQSIQTQMIWFNRYLESQGCQGVESKCKDFDETLFWFGEIGVNDYAYTLGSSVSDDTIRKLAVSSVSGVLQALLQKGAKYLVVQGLPLTGCLPLAMYLAPQDDRDDIGCVKSVNNQSYTHNLVLQAKLQEFRKQYPHAVIVYADYWNAYRTVMKNPGKYGFKEVFRVCCGSGEPPYNFSVFATCGTPNATVCTSPSQYINWDGVHLTEAMYKVVSDMFLQGNFSQPPFNFLLEKKERQG. 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01677 382 Gene3D SGNH hydrolase 30 365 IPR036514 -
Seca12g01677 382 Pfam GDSL-like Lipase/Acylhydrolase 43 359 IPR001087 GO:0016788
Seca12g01677 382 SUPERFAMILY SGNH hydrolase 40 362 - -
Seca12g01677 382 CDD SGNH_plant_lipase_like 43 365 IPR035669 -
Seca12g01677 382 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 22 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01677 Seca-Chr12 18308599 18311044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01677 39 364 Acyl Lipid Metabolism Gene Families AT4G10950 27.273 3.04e-30 118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01677 12 18308599 18311044 Seca12g01677 12 18308599 18311044 ECH