Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01378 ATGAGAAGGATCATTGCAATTAAGAATCCCCAAGAAGGTGCTGCCAACAAAGTCTCATTCTCGCTCTCACCCTCAGATTTGAACTCTAAATGTGCCTTCACTCTCCCTTTGATGCGTTTGATGGCCTTCTTCCTCTTTGCTTTCATGCTTTTCTCCGTACTCTTCTCACTCTCCATTGTTCTTCGAGATCCTCCTTCTGATGCCGCCCTTCGTGAACCATCACCATCAACAACCACTGTCTTCCAACTCAAACAAGGTTTGGACAATGATGCCTCTGATTCTGTTGAGTTGCTAAATGATAAACTGCTTGGAGGCCTTCTAGCTGCTGGATTTGATGAAAAATCTTGTCTCAGTAGGTATCAGTCAGTTATGTATCACAAAGGACTATCAGGGAAACCTTCTTCTTACCTCATTTCTAGATTAAGAAAATATGAAGCTCAACACACAGAATGTGGACCTTATACTGAATCTTATAACAGAACTGTGGAAGAACTCAGGTCTGGTCAATTTACTGAGTCCTCAGCTTGTAAATATGTGGTATGGATTTCATTTAGTGGGTTGGGGAATAGGATATTGACCCTAGCTTCTGCTTTTCTTTATGCTCTCCTCACAAATCGTGTTTTACTGGTTGACCCTGGAGTGGATATGGTTGATCTTTTTTGTGAACCATTTCCAGATGCTTCCTGGTTTCTACCTCCTGATTTTCCTCTTAAGAGCCACTTTCAAAATTTCAATCAGAAATCTGATCAATGCCATGGGAAAATGCTGAAAAATAAATCAATTACAAATTCCACCATGCCATCTTTTGCCTACCTTCATTTAGTCCATGATTATGATGACCATGATAAGCTTTTCTTCTGTGATGAAGAACAACTTTTTCTCCAGAACGTACCTTGGTTAATATTGAAATCAGATAATTACTTCACCCCATCTCTGTTCTTGATGCCATCTTTTGAGCAGGAGCTGAATGATCTCTTCCCAAAGAAGGACACAGTTTTCCATTTCTTGGGAAGATATCTGTTCCACCCCACAAATAATGTGTGGGGACTTGTTGTCAGATACTATCAAGCCTATTTAGCTAGAGTTGATGAAAGACTAGGCATACAAATTAGAGTGTTTGACACAGACCCTGGTCCATTTCAACATGTTTTGGATCAGATCTTAGCTTGTACTTTGAAGGAGAATCTTTTGCCTGATGTTGATCGCCAGCAGAATATTGTTAGTTCTTCATCAGGAATGCCAAAGTCAAAATCAGTGCTGATGACATCCTTAAGCTCTGGTTATTATGAAAAGGTAAGAGACATGTATTGGGAATATCCCACGGTGACTGGAGAAGTGGTTGGCATTTACCAGCCAAGTCATGAAGAATATCAACAAACACAAAAGCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTATCTGTTAAGCTTAACAGACATGTTGGTTACTAGTTCATGGTCTACTTTTGGCTACGTGGCTCAGGGAATTGGAGGTTTAAAACCATGGATACTCTACAAACCTGAGAATAGAACAGCCCCAGATCCTCCTTGTAAACGTGCCATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGCAAGGCTAAGAGAGGAACTGACACAGGTGAATTTGTTCCACATGTAAGACACTGTGAGGATATGAGCTGGGGCCTTAAGCTTGTAGACAATGAATTGTAG 1707 0.4089 MRRIIAIKNPQEGAANKVSFSLSPSDLNSKCAFTLPLMRLMAFFLFAFMLFSVLFSLSIVLRDPPSDAALREPSPSTTTVFQLKQGLDNDASDSVELLNDKLLGGLLAAGFDEKSCLSRYQSVMYHKGLSGKPSSYLISRLRKYEAQHTECGPYTESYNRTVEELRSGQFTESSACKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMVDLFCEPFPDASWFLPPDFPLKSHFQNFNQKSDQCHGKMLKNKSITNSTMPSFAYLHLVHDYDDHDKLFFCDEEQLFLQNVPWLILKSDNYFTPSLFLMPSFEQELNDLFPKKDTVFHFLGRYLFHPTNNVWGLVVRYYQAYLARVDERLGIQIRVFDTDPGPFQHVLDQILACTLKENLLPDVDRQQNIVSSSSGMPKSKSVLMTSLSSGYYEKVRDMYWEYPTVTGEVVGIYQPSHEEYQQTQKQMHNQKAWAEMYLLSLTDMLVTSSWSTFGYVAQGIGGLKPWILYKPENRTAPDPPCKRAMSMEPCFHAPPFYDCKAKRGTDTGEFVPHVRHCEDMSWGLKLVDNEL. 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01378 568 PANTHER FUCOSYLTRANSFERASE 2-RELATED 43 565 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca12g01378 568 Pfam Xyloglucan fucosyltransferase 79 537 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca12g01378 568 Gene3D - 173 225 - -
Seca12g01378 568 FunFam Galactoside 2-alpha-L-fucosyltransferase 174 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01378 Seca-Chr12 13740284 13742566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01378 38 564 Xyloglucan Fucosyltransferase1 AT2G03220 63.208 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01378 K13681 - gmx:100803305 884.789