Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g04198 ATGGGTTCAGAAGATGGTCATTTTGAATCGTCTAAAATGTCAAAAGACAAATTGCTTGGTGGACTCCTTGCTCCTGGGTTTGATGAAGGCTCTTGTTTGAGCAGGTATCAGTCCAGTTTATATCGCAAAACCTCACCCCATAAACCTTCTGCTTATCTCCTATCCAAGCTTCGAAGTTATGAGGAACTCCACAAACGTTGTGGACCCAATACTGAATCTTACAACAAGACTTTAAAACAACTTCAGTCAGGTCAAATAAGTAGTTCTACAGAGTCAGAGTGTAAATATGTTGTGTGGATATCTATTAGTGGCTTGGGGAACAAAATACTAACAGTGGCATCAGCATTTCTGTATGCTATCCTGACAAATAGAGTCCTGCTTGTTGACCCAGGAAAGGACATGCCTGATCTTTTTTGTGAGCCATTTCCAGAGATGTCATGGTTACTGCCCACTGATTTTCCTCTTAAAAGTAAGTTTAATATGTATGAGCAAAAGTCACCTGATTCTTATGGAAACATGCTCAAGAATAACATCTTAAACACTTCATCTGAATCTTTGCCCTCTTTTTTATATTTTCATTTGGTTCATGATTATGGAGACCATGATAAACTTTTCTTCTGTGATCAAGACCAAATGTTCTTTAGTAAAGTTCCCTGGTTAATTATGAAAAGTGACAACTACTTTGTTCCATCCCTTTTCTTGATCCCTTCTTTTGAGCAAGAACTTAGCAGATTGTTCCCCAACAAATCAACTGTTTTCCACCACCTGGGTCGGTATCTCTTTCACCCCTCTAACCAAGTGTGGGGCCTAATCACAAGGTACTATCAGGCTTACTTAGCCAAGGCAGATGAGAGAATTGGCATACAAATCAGAGTGTTTGAATCTGGAACTGGTCCATTTCAATATGTGATGGATCAAATTTTGGCATGTACTTTCAAGCAAAAGGTGCTGCCTGAAGTTGATAAGCAAGAAACTGTTGTCCCTCCATCAGGAAAGCCACACTTAAAAGCTGTTTTGATGACATCCTTGAGTTTTGGGTACTTTGAGAATTTAAGAAATATGTATTGGGAACAACCCACTGTCACTGGGGATATAATTGGGGTTTATCAGCCAAGCCATGAAGAATTTCAACAGACAGAGAAACAATTACACAACAGGAAGGCATGGGCAGAAATGTATCTCCTAAGTCTGACTGATGTGTTAGTCACAAGTGCATGGTCAACATTTGGCTATGTGGCTCAAGGTCTTGGAGGTTTGAAGCCATGGATTCTTTATAAACCAGACAATCATACAGCACCAGATCCACCTTGTCGTCGAGTAATGTCAATGGAACCTTGTTTTCATGCTCCCCCATTTTATGATTGCAAGGCAAAGACTGGAATTGATACGGGTAAACTTGTACCTCATGTAAGGCATTGTGAAGATATGAGTTGGGGCCTTAAGCTAGTTGATAGTCATGATGATTTATAG 1470 0.3986 MGSEDGHFESSKMSKDKLLGGLLAPGFDEGSCLSRYQSSLYRKTSPHKPSAYLLSKLRSYEELHKRCGPNTESYNKTLKQLQSGQISSSTESECKYVVWISISGLGNKILTVASAFLYAILTNRVLLVDPGKDMPDLFCEPFPEMSWLLPTDFPLKSKFNMYEQKSPDSYGNMLKNNILNTSSESLPSFLYFHLVHDYGDHDKLFFCDQDQMFFSKVPWLIMKSDNYFVPSLFLIPSFEQELSRLFPNKSTVFHHLGRYLFHPSNQVWGLITRYYQAYLAKADERIGIQIRVFESGTGPFQYVMDQILACTFKQKVLPEVDKQETVVPPSGKPHLKAVLMTSLSFGYFENLRNMYWEQPTVTGDIIGVYQPSHEEFQQTEKQLHNRKAWAEMYLLSLTDVLVTSAWSTFGYVAQGLGGLKPWILYKPDNHTAPDPPCRRVMSMEPCFHAPPFYDCKAKTGIDTGKLVPHVRHCEDMSWGLKLVDSHDDL. 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g04198 489 FunFam Galactoside 2-alpha-L-fucosyltransferase 92 143 - -
Seca11g04198 489 PANTHER FUCOSYLTRANSFERASE 2-RELATED 10 484 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca11g04198 489 Pfam Xyloglucan fucosyltransferase 13 456 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca11g04198 489 Gene3D - 91 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g04198 Seca-Chr11 118243889 118247386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g04198 11 483 Xyloglucan Fucosyltransferase1 AT2G03220 70.613 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g04198 K13681 - cave:132177716 824.698