Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca11g01381 ATGCGTTTGATGGCCTTCTTCCTCTTTGCTTTCATGCTTTTCTCTGTACTCTTCTCACTCTCCATAGTTCTTCGAGATCCTCCTTCTGATGCCGCCCTTCGTGAACCATCACCATCAACAACCACTGTCTTCCAACTCAAACAAACACAACAAGGTTTGGACAATGATGCCTCTGATTCTGTTGAGTTGCTGAATGATAAACTGCTTGGTGGCCTTCTAGCTGCTGGATTTGATGAAAAATCTTGTCTCAGTAGGTATCAGTCAGCTATGTATCACAAAGGACTATCAGGAAAACCTTCTTCTTACCTCATTTCTAGATTAAGAAAATATGAAGCTCAACACAGAGAATGTGGACCTTATACTGAATCCTATAACAGAACAGTGGAAGAGCTCAGATCTGGTCAATTTACTGAGTCCTCAGCTTGTAAATATGTAGTATGGATTTCATTTAGTGGGTTGGGGAATAGGATATTGACCCTAGCTTCTGCTTTTCTTTATGCTCTCCTCACAAACCGTGTTTTACTGGTTGACCCTGGAGTGGATATGGTTGATCTTTTTTGTGAACCATTTCCTCATGCCTCCTGGTTTCTCCCTCCTGATTTTCCTCTTAAGAGCCAATTTCAAAATTTCAATCAGAAATCTGATCAATGTCATGGAAAAATGCTGAAAAATAAATCAAGTACAAATTCCACCATGCCATCTTTTGCCTACCTTCATTTAGTCCATGATTATGATGACCATGATAAGCTTTTCTTCTGTGATGAAGAACAACTTTTTCTCCAGAATGTACCTTGGTTAATATTGAAATCAGATAATTACTTCACCCCATCTCTGTTCTTGATGCCATCTTTTGAGCAGGAGCTGAATGAACTCTTCCCAAAGAAGGACACAGTTTTCCATTTCTTGGGAAGATATCTATTCCACCCCACAAATAATGTGTGGGGACTTGTTGTCAGATACTATCAAGCTTATTTAGCTAGAGTTGATGAAAGAGTAGGCATACAAATTAGAGTATTTGACACAGACCCTGGTCCATTTCAACATGTTTTGGATCAGATCTTAGCTTGTACTTTGAAGGAGAATCTTTTGCCTGATGTTGACCGCCAGCAGAATATTATTAGTTCACCATCAGGAATGCCAAAGTCAAAATCAGTGCTGATGACATCCTTAAGCTCTGGCTATTATGAAAAGGTAAGAGACATGTATTGGGAATATCCCACAGTGACAGGAGAAGTGGTTGGCATTTATCAACCAAGTCATGAAGAATATCAACAAACACAAAAGCAGATGCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACAGACATGTTGGTTACTAGTTCATGGTCTACTTTTGGCTACGTGGCTCAGGGAATTGGAGGTTTAAAACCATGGATACTCTACAAACCTGAGAATAAAACAGCCCCAGATCCTCCTTGTAAACGTGCCATGTCAATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGCAAGGCTAAGAGAGGAACTGATACAGGTGAACTTGTTCCACATGTAAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATGAACTGTAG 1605 0.4037 MRLMAFFLFAFMLFSVLFSLSIVLRDPPSDAALREPSPSTTTVFQLKQTQQGLDNDASDSVELLNDKLLGGLLAAGFDEKSCLSRYQSAMYHKGLSGKPSSYLISRLRKYEAQHRECGPYTESYNRTVEELRSGQFTESSACKYVVWISFSGLGNRILTLASAFLYALLTNRVLLVDPGVDMVDLFCEPFPHASWFLPPDFPLKSQFQNFNQKSDQCHGKMLKNKSSTNSTMPSFAYLHLVHDYDDHDKLFFCDEEQLFLQNVPWLILKSDNYFTPSLFLMPSFEQELNELFPKKDTVFHFLGRYLFHPTNNVWGLVVRYYQAYLARVDERVGIQIRVFDTDPGPFQHVLDQILACTLKENLLPDVDRQQNIISSPSGMPKSKSVLMTSLSSGYYEKVRDMYWEYPTVTGEVVGIYQPSHEEYQQTQKQMHNQKAWAEMYLLSLTDMLVTSSWSTFGYVAQGIGGLKPWILYKPENKTAPDPPCKRAMSMEPCFHAPPFYDCKAKRGTDTGELVPHVRHCEDMSWGLKLVDNEL. 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca11g01381 534 PANTHER FUCOSYLTRANSFERASE 2-RELATED 9 531 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca11g01381 534 Gene3D - 139 187 - -
Seca11g01381 534 Pfam Xyloglucan fucosyltransferase 41 503 IPR004938 GO:0008107|GO:0016020|GO:0042546
Seca11g01381 534 FunFam Galactoside 2-alpha-L-fucosyltransferase 140 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca11g01381 Seca-Chr11 14798110 14800519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca11g01381 1 530 Xyloglucan Fucosyltransferase1 AT2G03220 62.056 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca11g01381 K13681 - gmx:100803305 881.708