Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02109 ATGTTGCACCCTATTTCATTTCCCTGTTCCAATCACGCTTCTACGACGGCGTTGCCTTCCCTATTATTTCTCAATACTACGTCGTTTCATCTCACTCGCCAATCTCCCTCTTTTCCGTTTCCTCGCCGGCCGTTCAACCCGCCGGCACTCCGATCAGTTCTCCCGGTTAGTGCCGGCGCCTCTCTACCACACTTCGATCTCGGCGGGGGCAAAGGAATGAGTGGGTTCATTGATGTCGAACTAAAAGTCCGTGATTATGAGTTGGATCAGTATGGTGTGGTCAACAATGCAGTTTATGCAAGTTACTGCCAACATGGTCGTCATGAACTCTTGGAAAGCATTGGTATTAATTGTGATGCTGTGGCTCGCAGTGGTGATGCATTGGCATTGTCAGAATTATCACTCAAATTCCTTGCACCACTAAGAAGTGGAGACAAATTTGTTGTGAAGGTTAGAATTTCTGGCTCTTCAGCTGCTCGTTTATACTTTGATCACTTCATCTATAAGCTGCCAAACCAAGAGCCTATTCTGGAAGCCAAGGCCACAGCGGTGTGGCTTGACAAAAACTATCGTCCAATTCGAATTCCAGCAGATATGAAGTCTAAATTTGTAAAATTTATTCGAAATGAAAACTCTTGA 639 0.4523 MLHPISFPCSNHASTTALPSLLFLNTTSFHLTRQSPSFPFPRRPFNPPALRSVLPVSAGASLPHFDLGGGKGMSGFIDVELKVRDYELDQYGVVNNAVYASYCQHGRHELLESIGINCDAVARSGDALALSELSLKFLAPLRSGDKFVVKVRISGSSAARLYFDHFIYKLPNQEPILEAKATAVWLDKNYRPIRIPADMKSKFVKFIRNENS. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02109 212 Gene3D Hotdog Thioesterase 70 207 - -
Seca10g02109 212 Pfam Thioesterase superfamily 91 174 IPR006683 -
Seca10g02109 212 CDD 4HBT 79 187 - -
Seca10g02109 212 PANTHER 4-HYDROXYBENZOYL-COA THIOESTERASE FAMILY MEMBER 44 210 - -
Seca10g02109 212 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 73 208 IPR029069 -
Seca10g02109 212 FunFam acyl-acyl carrier protein thioesterase ATL3, chloroplastic 67 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02109 Seca-Chr10 24138703 24142165 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02109 10 24138703 24142165 Seca10g02109 10 24138703 24142165 ECH