Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02033 ATGTCCTCAAACTCACACACACACAGAATGTACACCCCTCTCTTTCTCTTCTTTTCCATCACCACCGCCATCACCATTTGCACAGCTCTACCATATGGTCTCTCCTATCATATTGACTGTGGCAGCCCTACTAACAGCACCGACTCCTTCAACACCACATGGCTCTCCGACCGTTTCTTCACCGGCGGCACCTCATCCATCGTCTCAGAGCCTCTCCGATTCCACAACCAGCACGAGAAGACTCTCCGCTTCTTCCCAATCTCCTCCGGCAAGAAAAACTGCTACGCTATCCCTTCCCTTCCTCCCTCTCGCTACCTCTTCCGCACCTTCGTCGTCTATGACAACTACGACGGCAAGTCTCACCCTCCTTCCTTTGATGTCTCTGTTAGCGGAACTGTCGTCTTTTCCTGGCGCTCCCCCTGGCCTCAGTCCCTCGCTCGTGACGGTGCCTACTCTGACCTCTTCGCATCCATCCTCCCTGGCGAAGAAGAAGCCCTAATCTGCTTCTACAGCTTCGCTACTGATCCTCCGGTTATCTCCTCGCTCGAGGTTTTCGCCGCCGATCCAGCTTCCTACGGTTCTGCTTCAATTGGTAACAATGAGACTATACTTGTGAACTACGGGAGGCTCTCCTGCGGGTCAAACCAGTGGGGTCCAGGGTTCACCAATGATGCCGACCGGTTCGGACGGTCGTGGCAGTCCGATTCGGAATTTCGAGCCGGAGGGAACAGAGTTGTTGCGGTGTCGACGAGGAATGATATCGGCGGGACTGATCAGAAGCCGAATTACTTCCCGATGAAGCTGTACCAGACGGCGGCAGCGGCGGCGGAGACTGCGGAGGAAGGTGGTGGTGTTTTGGAGTATGAATTGAGCGTGGATGCGAAGCTGGATTACCTTGTGTGGCTGCATTTCGCGGAGATCCAAGGGAGTGTGAGGAAGGCGGGGCAGAGAGTGTTTGACGTGTTCATCAATGATGATAATCTGACAAGGGTGGATATATACAAGCAGGTGGGAAGTTATGCTGCGTTTACTTGGCATCATACGGTGAAGAATTTGAGTAGCAGCTTGATGAGCGTGAAGCTTGTGGGGGTTGTGGGTGCGCCTCTCATTTGTGGGATTGAGAATTATGCTCTGGTCCCCGGCGATCCTTCCACTGTTCCTGGACAAGTGATTGCCATGAAAGCATTAAAAGATTCACTTCGGGTTCCTGAGAGAATGGGTTGGAATGGTGATCCTTGTGCACCTACTAATTGGGATGCTTGGGAGGGAGTTACCTGCCGAATGAGTAAGGATAATACTGCTCTGGTGATAAGTCAAATCGATCTGGGAAGTCAAGGCTTGAAAGGATTCATAAGTGACCAGATCAGTCTTTTGTCAGACTTGGTAAGCCTGAACTTGAGTTCTAATTTGTTGGTTGGTGAAATACCTTCTGGACTAGGCCAAAAATCCTTGATACACCTGGATTTGTCCAACAATCAGTTAACAGGCTCCATACCAGAGAGTATAGCATCTTCAAGTTTGCAGCTTGTGCTGTTGAATGGCAACTTATTGGAAGGACGAGTGCCAGAGGAACTTTATTCAATTGGTGTGCATGGTGGAGCTATTGATCTCTCTGGCAACAAAGGTTTGTGCGGTGTACCATCTCTGCCAACTTGTCCTATGTTTTGGGAGAACGGCAGATTATCTACTCAGGGTAAAATTGCAATAGGCTTGTCGTGTCTTTTTGTTTTCTGTGTGATTCTGCTGCTGGTCTATATCTACATCAGAAGGAGAAGGAATGATTATGACTTTGCTCTGCCTCATGAATTACAATCATTAGCCGCCAAGAGAAACCGATATCAGAGGCAGAAATCCTTAATGGTTCTTGAAATGGAGAGTCAACACGCCAAGGGACCTTCATCTTTCACCACACAATAA 1917 0.495 MSSNSHTHRMYTPLFLFFSITTAITICTALPYGLSYHIDCGSPTNSTDSFNTTWLSDRFFTGGTSSIVSEPLRFHNQHEKTLRFFPISSGKKNCYAIPSLPPSRYLFRTFVVYDNYDGKSHPPSFDVSVSGTVVFSWRSPWPQSLARDGAYSDLFASILPGEEEALICFYSFATDPPVISSLEVFAADPASYGSASIGNNETILVNYGRLSCGSNQWGPGFTNDADRFGRSWQSDSEFRAGGNRVVAVSTRNDIGGTDQKPNYFPMKLYQTAAAAAETAEEGGGVLEYELSVDAKLDYLVWLHFAEIQGSVRKAGQRVFDVFINDDNLTRVDIYKQVGSYAAFTWHHTVKNLSSSLMSVKLVGVVGAPLICGIENYALVPGDPSTVPGQVIAMKALKDSLRVPERMGWNGDPCAPTNWDAWEGVTCRMSKDNTALVISQIDLGSQGLKGFISDQISLLSDLVSLNLSSNLLVGEIPSGLGQKSLIHLDLSNNQLTGSIPESIASSSLQLVLLNGNLLEGRVPEELYSIGVHGGAIDLSGNKGLCGVPSLPTCPMFWENGRLSTQGKIAIGLSCLFVFCVILLLVYIYIRRRRNDYDFALPHELQSLAAKRNRYQRQKSLMVLEMESQHAKGPSSFTTQ. 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02033 638 ProSiteProfiles Leucine-rich repeat profile. 483 505 IPR001611 GO:0005515
Seca10g02033 638 PANTHER OS07G0107800 PROTEIN-RELATED 37 608 - -
Seca10g02033 638 Pfam Malectin-like domain 38 377 IPR024788 -
Seca10g02033 638 FunFam Di-glucose binding protein with Leucine-rich repeat domain 209 376 - -
Seca10g02033 638 FunFam Putative LRR receptor-like serine/threonine-protein kinase 387 553 - -
Seca10g02033 638 Gene3D Ribonuclease Inhibitor 391 554 IPR032675 -
Seca10g02033 638 Gene3D - 208 377 - -
Seca10g02033 638 SUPERFAMILY L domain-like 386 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02033 Seca-Chr10 23259129 23271396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g02033 40 614 Receptor kinase-like Gene Family AT2G14440 27.181 2.06e-33 135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02033 10 23259129 23271396 Seca10g02033 10 23259129 23271396 ECH