Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g02012 ATGATAGTCAGGTTAGGACTCATAGTTGCTGCTTCAATTGCAGCTTATTCAGTTAAGCAGCTGAATGTTAAAGGCTCAAAATCAGTGGATATGAGGATTTCTTTATCAAATCTGCATGTTTGTAATCTTAATATCAATTTAGGCAAAGGAAATTTGTTTTATGTTTTGCAGAGGGAGGAGGAAGAAGAGAAGGAGGAGGTTAAGTTAATTAGCAGCATAATCAATAGAGCTAATGATTTTGAAGATGATATTCTACCAGAATTTGAAGACCTTCTATCTGGAGAGATTGAGTTTCCATTACCTACTGATAAGGCTGAGAAGGACAAAGTTTATGAAATTGAGATGGCAAATAATGCCAATGAACTAGAACGATTGAGAGAGCTAGTGAAGGAGTTAGAGGAGAGGGAAGTGAAACTTGAAGGGGAATTGCTTGAGTACTATGGTTTGAAGGAGCAGGAATCAGACATTGTAGAGTTACAAAGACAGCTAAAAATTAAGACTGTAGAAATAGATATGCTTAATATTACCATTAACTCCTTGCAGGCTGAGAGGAAAAAACTTCAAGAAGAGCTCATACATGGAGGTTCAGCCAAGAAAGAACTTGAAGTGGCTAGAAGCAAGATCAAGGAACTACAAAGGCAGATACAGCTTGAGGCTAACCAAACAAAAGGCCAGTTGTTGTTGCTTAAACAACAAGTTTCTGGTCTACAGGTGAAAGAAGAAGAGGCTGCCAGAAAAGATGCTCAAATTGAAAAGAAATTGAAAGCTGTGAATGACTTGGAGGTTGAACTTGTTGAGCTTAAGAGAAAAAACAAAGAACTTCAACATGAGAAGAGAGAGTTAACAGTTAAACTCAATGCTGCTGAAACTAAAGTAGCAGAGCTCTCCAATATGACAGAGAGTGAAATGGTAGCCAAGACAAAAGAGGAAGTAAGTAACCTGAGGCATACAAATGAAGACCTGCTAAAGCAAGTGGAAGGACTTCAGATGAACAGATTCAGTGAAGTTGAAGAGCTTGTATACCTTCGTTGGGTCAATGCATGTTTGAGGTATGAGCTCAGGAATTACCAGGCACCCTCAGGAAAATTATCAGCCCGTGATCTCAGCAAAAGTCTAAGCCCAAAATCACAAGGGAAAGCTAAGCAACTCATGTTAGAATATGCTGGATCAGAACGTGGGCAAGGGGACACAGATCTTGATAGCAACTTCTCCCATCCTTCTTCACCAGGAAGTGAAGATTTTGACAATGCTTCTATTGATAGCTCTACCAGCAAATATAGTAGCCTTAGCAAGAAAACTAGCCTAATTCAAAAGTTTAAGAAATGGGGCAAAAGCAAAGATGATTCTAGTGCTCTTTCATCACCAGCCAGATCTCTTTCAGGAAATTCTCCAAGAAGGATGAGTATGAGTGTTAAACCTAGAGGTCCATTGGAGTCCTTGATGTTGAGAAATGCTGGTGATAGTGTAGCCATAACTTCCTTTGGGCAGAGGGATCAAGAAACTCCTGATTCTCCTGACACTTCAACCTTAAGGAAAGTTTCATCCACTGACTCCTTAAATTCTGTTGCTACTTCATTCCAATTGATGTCTAAGTCAGTTGATGGATCTATGGATGAAAAGTATCCTGCTTATAAAGATCGCCATAAATTGGCCTTGGCAAGGGAGAAACAACTTAAAGAAAAGGCTGAGAAAGCAAGAGTGCTGAAATTTGGTGACAATTCAAGTTTGAATATGACAAAGTCTGAAAGAGATAGACCTATATCTTTGCCACCAAAACTTACTCAAATAAAAGAGAAGTCATTTGTTTCTGGTAGTACAAATGATCAATCTGATGATGGAAAGAATGTTGAAAATCAAACCATTAGCAAAATGAAGCTTGCTGACATTGAGAAAAGGCCTACTAGGGTGCCTAGGCCACCTCCTAAACCATCAGGTGGTGCTGCTGCTGTTAGCACAAATTCAAACCCTTCCAATGGAACATCATCTGCTCCATCCATTCCTCCTCCCCCTCCTCCTCCAGGTGCTCCACCGCCGCCACCAGGTGGACCACCTCCCCCACCTCCTCCCCCAGGAAGCCTGGCAAGAGGAGCAATGGATGGTGACAAAGTTCACAGAGCTCCAGAGCTAGTTGAATTTTATCAGTCATTGATGAAGAGGGAAGCAAAGAAGGACACTTCATCACTACTAGTTTCTTCAACAAGTAATGCATCTGATGCTAGGAGCAACATGATTGGAGAAATTGAGAATAGATCAACATTCCTCTTAGCTGTGAAAGCTGATGTAGAAACACAAGGTGATTTTGTCATGTCCTTGGCAACTGAAGTTAGAGCAGCCTCCTTCTCAGATATCAATGACCTGGTGGCCTTTGTGAACTGGCTAGATGAGGAACTTTCCTTCTTGGTTGATGAAAGAGCTGTCCTCAAGCACTTTGATTGGCCTGAAGGGAAAGCAGATGCACTAAGGGAGGCAGCTTTTGAATATCAGGATCTGATGAAATTGGAGAAGCAAGTCTCCACCTTCACTGATGATCCCAAACTCCCATGTGAAGCTGCTCTGAAGAAAATGTATTCACTGCTTGAAAAAGTGGAGCAAAGCGTTTATGCACTCTTGAGAACAAGAGATATGGCTATTTCACGGTACAGGGAATTTGGAATCCCAGTAAACTGGCTATTAGATTCAGGAGTTGTAGGCAAGATCAAGCTTTCTTCTGTGCAACTAGCAAAGAAGTATATGAAACGTGTTGCCTCAGAACTTGATGTATTATCTGGACCTGAAAAGGAACCAACTAGAGAGTTTTTGATTCTGCAAGGCGTGCGTTTTGCTTTCCGTGTCCATCAGTTTGCAGGAGGCTTTGATGCAGAGAGTATGAAGGCTTTTGAGGACCTAAGGAGTCGCATCCAAACCCCTCAAGCTGGTGAAGATAATAATAAACCAGAAACATAG 2943 0.4122 MIVRLGLIVAASIAAYSVKQLNVKGSKSVDMRISLSNLHVCNLNINLGKGNLFYVLQREEEEEKEEVKLISSIINRANDFEDDILPEFEDLLSGEIEFPLPTDKAEKDKVYEIEMANNANELERLRELVKELEEREVKLEGELLEYYGLKEQESDIVELQRQLKIKTVEIDMLNITINSLQAERKKLQEELIHGGSAKKELEVARSKIKELQRQIQLEANQTKGQLLLLKQQVSGLQVKEEEAARKDAQIEKKLKAVNDLEVELVELKRKNKELQHEKRELTVKLNAAETKVAELSNMTESEMVAKTKEEVSNLRHTNEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQAPSGKLSARDLSKSLSPKSQGKAKQLMLEYAGSERGQGDTDLDSNFSHPSSPGSEDFDNASIDSSTSKYSSLSKKTSLIQKFKKWGKSKDDSSALSSPARSLSGNSPRRMSMSVKPRGPLESLMLRNAGDSVAITSFGQRDQETPDSPDTSTLRKVSSTDSLNSVATSFQLMSKSVDGSMDEKYPAYKDRHKLALAREKQLKEKAEKARVLKFGDNSSLNMTKSERDRPISLPPKLTQIKEKSFVSGSTNDQSDDGKNVENQTISKMKLADIEKRPTRVPRPPPKPSGGAAAVSTNSNPSNGTSSAPSIPPPPPPPGAPPPPPGGPPPPPPPPGSLARGAMDGDKVHRAPELVEFYQSLMKREAKKDTSSLLVSSTSNASDARSNMIGEIENRSTFLLAVKADVETQGDFVMSLATEVRAASFSDINDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLEKQVSTFTDDPKLPCEAALKKMYSLLEKVEQSVYALLRTRDMAISRYREFGIPVNWLLDSGVVGKIKLSSVQLAKKYMKRVASELDVLSGPEKEPTREFLILQGVRFAFRVHQFAGGFDAESMKAFEDLRSRIQTPQAGEDNNKPET. 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g02012 980 MobiDBLite consensus disorder prediction 445 477 - -
Seca10g02012 980 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 414 968 IPR040265 -
Seca10g02012 980 Coils Coil 243 298 - -
Seca10g02012 980 Coils Coil 194 221 - -
Seca10g02012 980 Coils Coil 545 565 - -
Seca10g02012 980 MobiDBLite consensus disorder prediction 448 467 - -
Seca10g02012 980 MobiDBLite consensus disorder prediction 391 424 - -
Seca10g02012 980 MobiDBLite consensus disorder prediction 647 661 - -
Seca10g02012 980 MobiDBLite consensus disorder prediction 662 693 - -
Seca10g02012 980 Coils Coil 149 190 - -
Seca10g02012 980 Coils Coil 115 145 - -
Seca10g02012 980 MobiDBLite consensus disorder prediction 493 516 - -
Seca10g02012 980 MobiDBLite consensus disorder prediction 560 698 - -
Seca10g02012 980 MobiDBLite consensus disorder prediction 598 622 - -
Seca10g02012 980 MobiDBLite consensus disorder prediction 395 424 - -
Seca10g02012 980 MobiDBLite consensus disorder prediction 362 381 - -
Seca10g02012 980 MobiDBLite consensus disorder prediction 362 378 - -
Seca10g02012 980 Coils Coil 304 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g02012 Seca-Chr10 22939589 22945320 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g02012 10 22939589 22945320 Seca10g02012 10 22939589 22945320 ECH