Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01983 ATGCACAACACATACTTTAGCTCAATGATATATGGTGTTCGGTGTAAGGAATCACTGTCTTTATCTTTCAATGGCTGCTCAAACTTCTCTTATGAAAGATGTGACAGAACCCCGTCATACTGTTCATCATGCTGTGGTTGTTGTGATTGTTGTGCAATCTTCACTTACAGAGTACCCATAAGACGTATCCTTCTAAATGGGTTGAGGCAATCCACTCTCCTTCAATTGTCAGCATCTAGAAGGTTGCTTTTGGGTTGTGAAGACCAGTACTTTTCCCGGATACCAGCTTATGGGCTCCTCAGAGGTTGTTATGAGCTTAATGAGAGAACTGTTTGCAATGGAAGTAGGAGGAGAATAAAGGAAAGATGTTTTTGTGAAGCCTCACGAAAAGGGAGAGTAAATTTCCATTCAGTTGGTTCTGACGATTCCGAAGCAGTTCTCAGCTTTTTGAGTGAGGAAGCAGATAAAGATGCTACTTGTACCAAATGGAAGAATGTGTCTTCATCCAAAAGAATGGAAGCTGAGAAGAAAAGAAAAAAAGTGGGTAGAGAGAGACATTTGAGATTGAGTGAGACAGTAGAAACGGAGAAAAAAGGAAATTTGAAACAACATGAGACATCTGCCATAGACTTGAAAAGAGAGTATGAAAAACCCAACAAAGAAAGGGAAGCCTTTAGAAAAAGTGAAAACCATAGGAAGCGACGAGATGTGTCTAGTGGTTCATCTTATTACTCACTTTCATCAGGAGATTTTGAGAATGACCTGGAAGTTCAGAATAAGATTGGTTTTGAAGAATTGTCACTGGGATATGAGAAGGATGAATCAAATCAAATGGAGGGAGAAGTAAAAGAAGAATTCAACAGGCAAAGAGATGACTTGAAGAAGGCGCAGTATGCTTCAAATAAGGAAAGAATTGCATTTGATGCGGATATTGATTGGAACATGAGGAAGAAGTCTGAAAAGAAGCTGACTGAGGGAATTATGCAAGAAACAGAATCCAAAAGAGAACACCAAGATATTCATTCAAGAGCATCTAAAACATATGAATCTGGTTACGGAAAAACATCTATTTCACATAAGCAAGTCAATAGTGAGGAAGATAATTCATCTTTTGTTGAGCATTTGGATAAGAAAACAAACAAGGCATATACCCAAACAGGAAACAGAAGAATGTATCAATCAACGGATATACAAGAAGAGTCTGGCTGTGATGAAGTTGAGACAAGTTTGTTGTCACAAAAGACATTCAGTGGCAGGAAAGGGAACCTTGAAATGTCAGAAACACTGTTAAAGGAAACAAGCGATGAACATAAAAAATTTGTTGGTTCAACTTCTACCACAGGAAAGGAAACTTTGAAATCAAAGAAGACATTTAGTGGCAAGGAAGGGAACCTTGAGATGTCAGAAACACATTTACAGGAAACAAGTGATGAACGTAAAAAATTTGTTGGTTCTACTACCACAAGAAAGGATGTAATAAATAGAAGTTCCCAGAAATATGATGGAAATTCAAAAGTTGAAGACACTGAAAGGACCTCAAATACTAGGATGAAGAATGTGGGAGAGAAAAAAATTTCACTTTTGAGTTCTGTTCAAGGAGTGGAGGAGCAACATCAAAAAGGAGAGATAATTACACAAGCTAAAGAGAGAACAAGAAAATCTCAACAATTTTCTGAAGTATCACAAGCTCATGGGAGTAATGTTGAAGATACATCTATCATGAAGTCTAGAACTAGTGTAAAGAACTGGGAAGAGAGTTCAAACTTCAACTCAGATGCAAGGGATACATGGATTCAAACTGATAAAAGGAGAGCTCAGAGTTTTCAACATAGCAAAGGATCTCAACATGTCAGCACTTCATCAGAAGGCTACGCCAGTAATGAAAAGCAAGTTTCAAGTTCTCAAAAAACTTCTGAGAAGTTGAAATTCATCTCAAAAAGTAAATCGGCACCAGTTGTTAAAACTAGAGAAAGTTCCTCCCAAACTGATGAAAGGATTTTTGAATTGACCAGTGAGGACCAAAGACCTAGGAACCTATCAATATCTAATGAACCTTCCTCAAGAGAGGAATCCAGCTTCAAGGGATCCTTAAATTTGGTTTCTGAGGCTGGAAAACGAGTTATATTAGCAGGAGGTAATGAAAGGAGCTCTGCAGTAATGTTGATCCCTTCCTCTTCCCAACTGGATAGAGGCTCAGCACATGTTCAACCCACTGCTGGAATGGCAAGCCCTGAGATCTCCCTTGAAACTTCAGAAAGTGGCTCATCTACTTTGTATGACCATTCAGGAAGAAGTCCTGCTTTGCTTTCAGGACCATTTTCTGGATATAAAACTGATCAGGCATATAGCGAGCCTTCTAATATCATGGCCCCAGAAGGGGCTCTTGATTCAGCTGGTCGTTTAGAGGAATCATCAAAACAATTTGTTGATGAGTTCATAGAGAGGGTCAGGCATGAAGTCACAACTCCAGAAACACAAGAGATGGAAATTTATGGAACAAAGTTGGCTGTTGATGTTGAGGATAATCGTACCTACAGTTCAATGCAACAAGGCACTCAAAATGTCTCTCAGTCAAAGAAGCATGATTCTAGCCGTTCGTCTGGGTTTCCTGGGACCAAAGGACCTTCTGATGAAATGTGGGATGTAACAGAACCATCTGTTGAGCAAGGTGTAGTAGCTGAAGAGCCAGAGATCAACAAGGAAACTGAAAAACCAATTGTCAATAGAACTGGAAGGTCCCTTTGGGGTATGATTGCCGATGTTGTTCGTTTACGTTGGGGTTCACGTGCTGGTTCCACCACATCAGCTGGAAGATCAGGTGAGAGAAACTCATCAAACAAATCTGATAGTGAGACATGGTTTTCTGGGCAGGAGCATGAGGAAACAAGTAAAAGTAATGTAATAAAAGAAACAAGTGTGCTACCACAAGCCGTGACATCTGATAAGTTAAAACCAGGTAAAAGTTATACCCAAAGTGAGGGAGAGGTATCTGACACTAAAAAATTGAAGGACAAAGGAAAACATCCTGAAGTTGGACCATCTTCTCCAAATACATTAGAAAGTGGATCAACATCAGTGGGTGCCTCATATGCTTCTGGAGAGGAAAATGCTAGTTGGACTGAAGATGGAAAAGATTTGAAAGTCACTACTTCTGGCATAAAAAACATGGAATCATCAATTCCAATACCTGCCAGAGGGCATCCTATTGTAGGTGAAGTTGTAAATATTGGAGGATCCGACATGTCTGGAATTGAATCAGTGGTGCCAATCAAGGAACCTGTTGCTCCAGTGCAGTCTGAATTGTCTGGCCCAGAGCGAAAGGATGGGGAGTTGAAGCAAAGGAAGTTTCAGCGGAACAGGCAAGTCTTAAGAGATAGGTTTGATGACTGGGAAGAAGCCTATAAACTTGAACTTGAACAAAGAAGAATGGATGAAATGTTCATGACGGAAGCACTTTTGGAAGCCAGGAAGGCTGCTGATATTTGGGAGGTTCCTGTTGGTGCTGTTCTTGTGCAGCATGGGAAAATTATTGCACGAGGATGCAACTTAGTAGAAGAGTTACGGGACTCCACTGCCCATGCAGAGATGGTTTGTATACGAGAAGCTTCAAAACTTCTTCACTCATGGAGACTATCAGAAACTACACTTTATGTAACGCTTGAGCCCTGTCCAATGTGTGCTGGCGCCATTCTTCAGGCAAGAATAGATACTGTTGTATGGGGAGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGGCTTTTCCCTGATGGAGGAGAAAATGTCTCGGAAGCAAGAGATATGCCACCTGCCCCAGTGCACCCATTCCATCCAAATATGAAAATAAGAAGAGGGGTCTTGGCAACGGAGTGTGCAGATGTAATGCAGCAATTCTTTCAGCTTAGAAGGAAAAAGAAGAAAGAAGAACCATCAAAAGACCCCTCTCACCTTGCTGTTACTCACCACCATCCCTCCAAGTTTCTTAGCAAGATGCATGATATCTTCCACATGATGTTCTGTTTGTAA 4032 0.406 MHNTYFSSMIYGVRCKESLSLSFNGCSNFSYERCDRTPSYCSSCCGCCDCCAIFTYRVPIRRILLNGLRQSTLLQLSASRRLLLGCEDQYFSRIPAYGLLRGCYELNERTVCNGSRRRIKERCFCEASRKGRVNFHSVGSDDSEAVLSFLSEEADKDATCTKWKNVSSSKRMEAEKKRKKVGRERHLRLSETVETEKKGNLKQHETSAIDLKREYEKPNKEREAFRKSENHRKRRDVSSGSSYYSLSSGDFENDLEVQNKIGFEELSLGYEKDESNQMEGEVKEEFNRQRDDLKKAQYASNKERIAFDADIDWNMRKKSEKKLTEGIMQETESKREHQDIHSRASKTYESGYGKTSISHKQVNSEEDNSSFVEHLDKKTNKAYTQTGNRRMYQSTDIQEESGCDEVETSLLSQKTFSGRKGNLEMSETLLKETSDEHKKFVGSTSTTGKETLKSKKTFSGKEGNLEMSETHLQETSDERKKFVGSTTTRKDVINRSSQKYDGNSKVEDTERTSNTRMKNVGEKKISLLSSVQGVEEQHQKGEIITQAKERTRKSQQFSEVSQAHGSNVEDTSIMKSRTSVKNWEESSNFNSDARDTWIQTDKRRAQSFQHSKGSQHVSTSSEGYASNEKQVSSSQKTSEKLKFISKSKSAPVVKTRESSSQTDERIFELTSEDQRPRNLSISNEPSSREESSFKGSLNLVSEAGKRVILAGGNERSSAVMLIPSSSQLDRGSAHVQPTAGMASPEISLETSESGSSTLYDHSGRSPALLSGPFSGYKTDQAYSEPSNIMAPEGALDSAGRLEESSKQFVDEFIERVRHEVTTPETQEMEIYGTKLAVDVEDNRTYSSMQQGTQNVSQSKKHDSSRSSGFPGTKGPSDEMWDVTEPSVEQGVVAEEPEINKETEKPIVNRTGRSLWGMIADVVRLRWGSRAGSTTSAGRSGERNSSNKSDSETWFSGQEHEETSKSNVIKETSVLPQAVTSDKLKPGKSYTQSEGEVSDTKKLKDKGKHPEVGPSSPNTLESGSTSVGASYASGEENASWTEDGKDLKVTTSGIKNMESSIPIPARGHPIVGEVVNIGGSDMSGIESVVPIKEPVAPVQSELSGPERKDGELKQRKFQRNRQVLRDRFDDWEEAYKLELEQRRMDEMFMTEALLEARKAADIWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMVCIREASKLLHSWRLSETTLYVTLEPCPMCAGAILQARIDTVVWGAPNKLLGADGSWIRLFPDGGENVSEARDMPPAPVHPFHPNMKIRRGVLATECADVMQQFFQLRRKKKKEEPSKDPSHLAVTHHHPSKFLSKMHDIFHMMFCL. 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01983 1343 MobiDBLite consensus disorder prediction 348 365 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 1095 1114 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 610 640 - -
Seca10g01983 1343 FunFam tRNA-specific adenosine deaminase 1137 1316 - -
Seca10g01983 1343 SUPERFAMILY Cytidine deaminase-like 1136 1309 IPR016193 GO:0003824
Seca10g01983 1343 MobiDBLite consensus disorder prediction 454 486 - -
Seca10g01983 1343 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1142 1264 IPR002125 -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 1014 1036 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 322 344 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 366 380 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 171 249 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 846 871 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 846 881 - -
Seca10g01983 1343 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 1116 1309 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 994 1010 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 501 518 - -
Seca10g01983 1343 Hamap tRNA-specific adenosine deaminase [tadA]. 1148 1305 IPR028883 GO:0002100|GO:0008251
Seca10g01983 1343 MobiDBLite consensus disorder prediction 431 695 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 322 389 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 930 952 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 171 238 - -
Seca10g01983 1343 Gene3D Cytidine Deaminase, domain 2 1132 1318 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 556 595 - -
Seca10g01983 1343 CDD nucleoside_deaminase 1148 1255 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 658 672 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 967 993 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 673 695 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 541 555 - -
Seca10g01983 1343 MobiDBLite consensus disorder prediction 930 1044 - -
Seca10g01983 1343 Pfam MafB19-like deaminase 1145 1244 IPR028883 GO:0002100|GO:0008251
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01983 Seca-Chr10 22373813 22382427 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01983 10 22373813 22382427 Seca10g01983 10 22373813 22382427 ECH