Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01973 ATGAGTATATGCCATTATGAAGGCTCAGAGGAAGATGTAGATTGTGCTGTGTGTCTCTGCAAAATTGAAGAAGGAGAAGAGATTAGAGTGCTGAGATGTGAACATATGTTTCACAGAAATTGCTTAAATAGATGGGAAAGTGGTTTCAAGAATTATGCCACTTGCCCTCTTTGCAGAGAAGCAGTGGGCCCAAGAAAGGTCATCAGTGAGCTTGGTGCTCAAGTTCTGTTGTTTGAGTTTTGTAATTCTATCCGTACTGATGATGACCGTCAAACATGGTGGCTACGCTAA 291 0.4158 MSICHYEGSEEDVDCAVCLCKIEEGEEIRVLRCEHMFHRNCLNRWESGFKNYATCPLCREAVGPRKVISELGAQVLLFEFCNSIRTDDDRQTWWLR. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01973 96 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 66 IPR013083 -
Seca10g01973 96 PANTHER - 10 70 - -
Seca10g01973 96 Pfam Ring finger domain 14 59 IPR001841 -
Seca10g01973 96 SUPERFAMILY RING/U-box 10 65 - -
Seca10g01973 96 ProSiteProfiles Zinc finger RING-type profile. 15 59 IPR001841 -
Seca10g01973 96 SMART ring_2 15 58 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01973 Seca-Chr10 22229240 22229530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca10g01973 14 62 C3H Transcription Factor Family AT1G15100 57.143 2.69e-13 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01973 10 22229240 22229530 Seca10g01973 10 22229240 22229530 ECH