Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca10g01970 ATGGCCAACGTTGTGGATCAAGATCAGCAATGGCTGCTCAGTTGCTTGTCTGCCACATTCGACCCCAACCAGGAGGTTCGCTCTTTTGCCGAAGCGTCCCTCGATCAAGCCTCTCGCCAACCAGGTTTTGGCAGTGCATTATCCAAAGTTGCTGCAAACAAGGAGCTTGCTCTTATGAACTTGGATGATTTAACCTTCCTCTACTTAGCTGCAGTCCTTCTTAAGCAATTAGTTAAAAAACATTGGCAGGAGGGTGAGGACTCGTTTGAACCTCCTGTTATTTCTAATGATGAAAAGGAGATCATCCGCAGAATGCTTCTGTTGTCATTGGATGACCCTCATAGGAAAATTTGCACAGCTATTGGTATGGCTGTGGCATCCATTGCACTGTATGACTGGCCAGAGTTATGGCCAGATCTGTTACCATTTCTCTTGAACTTGATTAACAATCAAACTAGCTTGAATGGAGTGCATGGAGCTATGAGATGCTTGGTTCTTCTCTCTGCGGACTTGGATGATAAAGTGGCTCCAACATTAACACCTGCTTTGTTCCCCAGTTTGCTGACAATTGTATCCTCTCCCCAGATATATGACACATATCTACGAACCAAGGCCCTTTCAGTAGTCTATTCTTGCACTTCTATGCTGGGGACAATGAGTGGTGTCTATAAGGCAGAAACGAGTTCTCTGATAGTTCCGTTGCTTAAACCATGGATGGAACAATTTTCTTCTATTTTAGAAACTCCAGTTCAATCTGAAAATCCAGATGATTGGAGTATCAGAATGGAGGTTTTGAAGTGCTTGAATCAGTTTATTCAGAATTTCTCAAGTCTCATTAAAAGTGAATTTGAGGTTATATTGGGGCCATTGTGGAATACATTTGTCTCCGCTTTGAGAGTTTACGAGCAAGCATCTATTGAAGGAACAGAGGATTCATTTGAGGGAAGATATGATTCTGATGGTTCAGAGAAAAGCCTTGATTCATTTGTTATCCAGCTGTTTGAACTTCTGTTGACCATTGTGGGTAATTCAAGACTGGGAAAGGTGGTTGTGGCTAATGTCAAAGAATTGGTGTACTACACTATTGGTTTTCTTCAAATGACAGAACAGCAGGTTCATACATGGTCTATGGATGCTAACCAATTCATTGCTGATGAAGAGGATGCTACTTATAGCTGCCGTATTTCTGGTGTGCTTTTACTGGAAGAGGTAGTCAATTCTTTTGACAGCGAAGGTTTTCTGGCCATCATAGATGCTGCAAAACGATGGTTCACCGAGTCTCAAATAAGAAAAGTGGCTGGCAGTGCAAGCTGGTGGAGGATAAGAGAAGCAACTCTTTTTGCCTTATCATCTCTTTCAGAACAACTGTCTGAGACACAGGAGTCAAGTTTTGAGACAAGTAGCTTGAAGAACCTGGTTGAGCAGATAGTCACTGAGGACTCTCTAATAGGTCCTCTTGATTATCCGTTTCTATATGCTCGCATTTTTACGACAGTTGCTAAATTCTCCTCTGTGATAAGTAGTGGAGTACTAGAGCACTTTCTCTATGCAGCCATGAAGGCAATTACGATGGATGTGCCTCCACCTGTAAAAGTAGGTGCCTGCCGGGCACTTTCCCAGCTCCTCCCTGAAGCAAAGAATGAAATTGTCCAACCACAATTGTTGGGTTTATTTTCATCCCTCACAGATCTTCTTAATCAAGCATCAGATGAAACCTTGCATATGGTACTTGAAACATTGCATGCAGCAGTGAAGGCAGGTCATGAATCATCGGCATTGGTAGAAAGCATTGTTTCTCCTGTAATCCTTAATGTATGGGCATCACATGTCTTGGATCCTTTCATCAGTATTGATGCACTTGAAGTTCTTGAGGCAATCAAAAACGTTCCTGGATGTATACATCCATTGGTTTCCAGAATTTTACCATATATTGGACCAATTTTAAATAAACCCCTGGAGCAGGCTGATGGTTTGGTAGCTGGGTCATTAGATCTGGTAACAATGTTACTGAAGAATGCCCCAGGTGATGTAGTGAAAGCAATATATGATGTCTCTTTTAATGCTGTTATCAGAATAATCCTTCAAAGTGATGAACACAGTGAAATTCAGAACGCCACGGAATGTTTATCTGCTTTTATATCCGTCGCAAGACAAGAAGTTCTTGTTTGGGGATCTGATTCTGGATCAACTATGAGAAGTTTACTTGGTATAGCTTCAAGACTACTAGACCCCAATTTGGAAAGCTCTGGGTCACTTTTTGTTGGGAGTTACATTCTTCAACTTATATTGCATTTCCCAGCACAAATGGCAGTACATATACAAGACCTGGTTGCTGCTCTTCTCAGGCGTATGCAATCTGCTCAAATTGCTTCCTTGAGAAGCTCATTGCTAGTTGTTTTTGCCAGATTGGTACACATGAGTGTTTCTAATGTTGGGCAATTTATTGATTTGCTGATCTCAATTCCTGCTGAAGGACATGATAATTCCTTTGCTTATTTAATGTCAGAATGGACTAAGCAACAAGGTGAGATACAGGGGGCCTATCAAATAAAGGTTACTACAAGCGCTCTGGCCTTGTTGCTAACCAGTAGGCACAACGAACTGGCTAAAACACATGTCCAAGGCCATTTGATTAAGTCTGGCATGGGAATAACCACAAGATCAAAAGCTAAATCAGCTCCAGATCAGTGGGTAATGTTGCCACTTCCTACAAAGATTGTGGCTTTACTGGCAGATGCATTAACTGAAATACAAGAACAGGTTTTGGCTGGTGATGAAGAGGATAGTGACTGGGAAGAAGTTCAAACAGATGGCATTGAAAATGATAAAGAGGTTCTTTATTCAGTGTCTACATCAGCTTTGGGAAAACCCACATATGAACATCTTGAAGCAATGGCCAAAGTATTTAACGAGGATCAAGATGATCAGTATGAAGATGACCTTTTAAGTGTTGCCGATCCTCTTAACCAGATAAATCTGGCAAATTACCTGGTGGATTTCTTTGTTAACTTTTCACAGTCTGACAGACAGCTCTTAGATCACATTTGCAAGAGCTTGACTCAGTCTCAACAAAATGCGATTCAAATGGTATTGCGGAGGTGA 3102 0.4149 MANVVDQDQQWLLSCLSATFDPNQEVRSFAEASLDQASRQPGFGSALSKVAANKELALMNLDDLTFLYLAAVLLKQLVKKHWQEGEDSFEPPVISNDEKEIIRRMLLLSLDDPHRKICTAIGMAVASIALYDWPELWPDLLPFLLNLINNQTSLNGVHGAMRCLVLLSADLDDKVAPTLTPALFPSLLTIVSSPQIYDTYLRTKALSVVYSCTSMLGTMSGVYKAETSSLIVPLLKPWMEQFSSILETPVQSENPDDWSIRMEVLKCLNQFIQNFSSLIKSEFEVILGPLWNTFVSALRVYEQASIEGTEDSFEGRYDSDGSEKSLDSFVIQLFELLLTIVGNSRLGKVVVANVKELVYYTIGFLQMTEQQVHTWSMDANQFIADEEDATYSCRISGVLLLEEVVNSFDSEGFLAIIDAAKRWFTESQIRKVAGSASWWRIREATLFALSSLSEQLSETQESSFETSSLKNLVEQIVTEDSLIGPLDYPFLYARIFTTVAKFSSVISSGVLEHFLYAAMKAITMDVPPPVKVGACRALSQLLPEAKNEIVQPQLLGLFSSLTDLLNQASDETLHMVLETLHAAVKAGHESSALVESIVSPVILNVWASHVLDPFISIDALEVLEAIKNVPGCIHPLVSRILPYIGPILNKPLEQADGLVAGSLDLVTMLLKNAPGDVVKAIYDVSFNAVIRIILQSDEHSEIQNATECLSAFISVARQEVLVWGSDSGSTMRSLLGIASRLLDPNLESSGSLFVGSYILQLILHFPAQMAVHIQDLVAALLRRMQSAQIASLRSSLLVVFARLVHMSVSNVGQFIDLLISIPAEGHDNSFAYLMSEWTKQQGEIQGAYQIKVTTSALALLLTSRHNELAKTHVQGHLIKSGMGITTRSKAKSAPDQWVMLPLPTKIVALLADALTEIQEQVLAGDEEDSDWEEVQTDGIENDKEVLYSVSTSALGKPTYEHLEAMAKVFNEDQDDQYEDDLLSVADPLNQINLANYLVDFFVNFSQSDRQLLDHICKSLTQSQQNAIQMVLRR. 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca10g01970 1033 ProSiteProfiles Importin-beta N-terminal domain profile. 30 112 IPR001494 GO:0006886|GO:0031267
Seca10g01970 1033 PANTHER IMPORTIN-7, 8, 11 8 1026 - -
Seca10g01970 1033 FunFam ARM repeat superfamily protein 9 1027 - -
Seca10g01970 1033 SUPERFAMILY ARM repeat 8 1031 IPR016024 -
Seca10g01970 1033 Gene3D - 7 1032 IPR011989 -
Seca10g01970 1033 Pfam Importin-beta N-terminal domain 30 110 IPR001494 GO:0006886|GO:0031267
Seca10g01970 1033 SMART IBN_N_2 30 112 IPR001494 GO:0006886|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca10g01970 Seca-Chr10 22176281 22195273 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca10g01970 10 22176281 22195273 Seca10g01970 10 22176281 22195273 ECH