Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi710g00004 ATGTTGGGCAACTGTGAGAAAATGAAGCAGCAAGAAGGGCTAAAGTGTCCTCGTTGTGAGTCATCAAACACAAAGTTCTGTTACTACAACAACTACAGCTTGTCACAGCCAAGACACTTTTGCAAAGCCTGCAAGAGATACTGGACAAGAGGTGGAACTCTCAGGAATGTCCCTGTTGGTGGTGGTTGCAGAAAAAACAAGCGTCTCAAGCGTCCAACATCTACTTCCTCTCCTTCTCCTTCTTCTTCACAGCCCCAGATCGATGCTGCTAATGCTTCAACCTCAAATCACATCACTACTATGTTTTATGGTAACTCTTGTGATGTGAATCTTCCATTCCCAAGGTTCAATTCTAGAAATATCACAAGTTCTTCTGGGTTTGATAATGATCTTCAGCCTCAGTTGAATGCCCTTGGATTAGGTTTTTCGTCATCATCAGGGTTTATGTCCAGTACTACTGAAGCTAATGAAAATGGTTACAGGAATGGGTTTAGTTCAAATGTTTCGAGTTATGATTCTATTTTCGGTTCTTCAAATTCTGCATCCCTGTTGAGCCCTACTCTGCTGCTGCAGCAGCATAAATGGATGAATGGTCCTTCTTTGGAGGGAGTGCAAAGGGCAAGTAATAGCAGTGAGACTGCAGAGATGGTGGCTTTAAAAGACGTGAAAGTAGAATTAGGAGGAGGACAAACATGGAATATGAATGGTGCTTGTCAAAACCAGATGATGATGGACCATGTGGCCTTGTACGATCCTTCACTTTACTGGAATATGGGTGCTGCTTGGAACGATCAACCTAACATTGGTCCATCAGTTACTTCTCTCATCTAG 831 0.4284 MLGNCEKMKQQEGLKCPRCESSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLKRPTSTSSPSPSSSQPQIDAANASTSNHITTMFYGNSCDVNLPFPRFNSRNITSSSGFDNDLQPQLNALGLGFSSSSGFMSSTTEANENGYRNGFSSNVSSYDSIFGSSNSASLLSPTLLLQQHKWMNGPSLEGVQRASNSSETAEMVALKDVKVELGGGQTWNMNGACQNQMMMDHVALYDPSLYWNMGAAWNDQPNIGPSVTSLI 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi710g00004 276 Pfam Dof domain, zinc finger 13 68 IPR003851 GO:0003677|GO:0006355
Sebi710g00004 276 MobiDBLite consensus disorder prediction 72 89 - -
Sebi710g00004 276 MobiDBLite consensus disorder prediction 59 89 - -
Sebi710g00004 276 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Sebi710g00004 276 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Sebi710g00004 276 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 9 167 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi710g00004 Sebi-Chr710 64635 65831 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi710g00004 14 276 C2C2-Dof Transcription Factor Family AT1G28310 40.940 5.77e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sebi710g00004 zf-Dof 1.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi710g00004 - - qlo:115990486 270.011