Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi523g00027 ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGAGGAGTGGTTAAACCTATGGAAGGAGGTTCAAATAAGCCTCCTATGTTGGAGAGAAGGGCAAGGCCTCAAAAAGATCAAGCTTTGAACTGTCCAAGGTGCAATTCAACCAACACTAAATTCTGCTACTACAATAACTATAGCCTCTCTCAGCCAAGGTTAAGCTTCAGGAGTTCTGATCAAGTTACACCAGTTAGCGTTAATTACACCAAACGGTGCCAGAAAGAAGAAGAGAAAACAAACCCCGATCAGGTTGCAGGTGATCCTCAGAGCGAGAACGAAAATGGGTTGCAGATCTTCAGAACGAGAACCGCCTATTGTTTCTCACTCTCAAATATAAACTATTCACCTACTGTTTCTGTGAGTGTGGGAATGATGAACACGAGCTTGAAAGAGGATACAACGCAAATGGAAGTTAGGGTTCAGTAA 462 0.4372 MDTAQWAQGNIGGVVKPMEGGSNKPPMLERRARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRLSFRSSDQVTPVSVNYTKRCQKEEEKTNPDQVAGDPQSENENGLQIFRTRTAYCFSLSNINYSPTVSVSVGMMNTSLKEDTTQMEVRVQ 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi523g00027 153 MobiDBLite consensus disorder prediction 1 39 - -
Sebi523g00027 153 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 64 IPR045174 GO:0003700|GO:0006355
Sebi523g00027 153 Pfam Dof domain, zinc finger 37 68 IPR003851 GO:0003677|GO:0006355
Sebi523g00027 153 MobiDBLite consensus disorder prediction 82 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi523g00027 Sebi-Chr523 664816 670856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi523g00027 1 64 C2C2-Dof Transcription Factor Family AT1G64620 60.526 2.78e-20 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sebi523g00027 zf-Dof 7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi523g00027 - - lja:Lj0g3v0363619.1 127.487