Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi428g00025 ATGGAAGATAATATGGAGACTAGCAGCACAGATCAAGATAAAGTCTTCAAGAAACCAGACAAGATTCTTCAATGTCCAAGATGCAACAATTTGGAGACTAAATTTTGTTATTTCAACAACTACAATGTTCAATCAACCTCGGCATTTCTGCAAAGAACTGTCAAAGGTATTGGACTGCTGGTGAACAATGAGAAATGTTCCTGTTGGTGCTGGGAGACGGAAGAACAAGCACATAGCTTCTCAATACCCGGCAAATTTTTGTATCTTCTGAAGGAATTCCAACCACCAGGTCCTTCAACAGATAATGGTACTGTATTAAAATTTGGTCCAGATGCCCCTCTCTGTGAATCCATGGAATCAATGTTTAATCTTAGAAACCAACAAAGAAATGTTGATGCAAACTCTATGAATTGTTCAGAAAATGGAGAGGAAGAAGGTTGGAACAATGTTGCTTCCATGGCAGGAGTTCATCCATCTTCACTGCATCCGGCTACAATGCGGTGGTGTCCCGCGCCAATGGTGGCAGTTCCAACCATTTGTCCACCAAACATTCCCTTGCAAATTGTTCCTGGATCATACTGGAATGGAACACCTTTGTGGGCTGCTGGAAATGGGACAGTTTCAATAGGTTCCAATGGTTGCCTTTCACCATCTTCCTCTACTAGTAACAGCTGCTGCTCAGGCAATGGCCCCCCAACCCTTGGCAAACACCCTAGAGACACTGTTTTCACAGATGAACAGAAATCAGAAAAGTGTGTTTTGATTCCAAAGACCCTTAGAATTGATGATCCAAATGAGGCCTCAAAAAGTCCTATATGGGCTACATTAGGTATCAAGGCCTGA 843 0.4247 MEDNMETSSTDQDKVFKKPDKILQCPRCNNLETKFCYFNNYNVQSTSAFLQRTVKGIGLLVNNEKCSCWCWETEEQAHSFSIPGKFLYLLKEFQPPGPSTDNGTVLKFGPDAPLCESMESMFNLRNQQRNVDANSMNCSENGEEEGWNNVASMAGVHPSSLHPATMRWCPAPMVAVPTICPPNIPLQIVPGSYWNGTPLWAAGNGTVSIGSNGCLSPSSSTSNSCCSGNGPPTLGKHPRDTVFTDEQKSEKCVLIPKTLRIDDPNEASKSPIWATLGIKA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi428g00025 280 PANTHER CYCLIC DOF FACTOR 2 5 44 IPR045174 GO:0003700|GO:0006355
Sebi428g00025 280 Pfam Dof domain, zinc finger 20 44 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi428g00025 Sebi-Chr428 492776 493811 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi428g00025 12 279 C2C2-Dof Transcription Factor Family AT5G39660 31.715 3.98e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Sebi428g00025 zf-Dof 8.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi428g00025 - - ccaj:109792807 330.102