Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi251g00022 ATGAGTTTTGCCAAAATCTTTGCTCTGTGCTTCGTAGCTGTCCCACTCGTCGTCACACTCAGGCTTGCTCTCTCCTACCCTTCCTCCGATCCAAACCCGGGTTTTGCTCAGGCACGAATTTTGGACAAAGTGTCTCGGACTGATACCTCAGTGGCTGAAAATGGTTCAGAAGATGGTCATTTTGAATCGTCTAAAATGTCAAAAGACAAATTACTTGGTGGACTCCTTGCTCCTGGGTTTGATGAAGGCTCTTGTTTGAGCAGGTATGAGTCCAGTTTATATCGCAAAACCTCACCTCATAAACCTTCTGCTTATCTCCTATCCAAGCTTCGAAGTTATGAGGAACTCCACAAACGTTGTGGACCCAATACTGAATCTTACAACAAGACTTTAAAACAACTTCAGTCAGGTCAAATAAGTAGTTCTACAGGGTCAGAGTGTAAATATGTTGTATGGATATCTATTAGTGGCTTGGGGAACAAAATACTAACAGTGGCATCAGCATTTCTGTATGCTATCCTAACAAATAGAGTCCTGCTTGTTGACCCAGGAAAGGACATGCCTGATCTTTTTTGTGAGCCATTTCCAGAGAAGTCATGGTTACTGCCCACTGATTTTCCACTTAAAAGTAAGTTTGATATGTATGAGCAAAAGTCACCTGATTCTTATGGAAACATGCTCAAAAATAACATCTTAAACACTTCGGCTGAATCGTTGCCCTCTTTTTTATATTTTCATTTGGTTCATGATTATGGAGAACATGATAAACTTTTCTTCTGTGATCAAGACCAAATGTTCTTTAGTAAAGTTCCCTGGTTAATTATGAAAAGTGACAACTACTTTGTTCCATCCCTTTTCTTGATCCCTTCTTTTGAGCAAGAACTTAGCAGATTGTTCCCCAACAAATCAACTGTTTTCCACCACCTGGGTCGGTATCTCTTTCACCCCTCTAACCAAGTGTGGGGCCTAATCACAAGGTACTATCAGGCTTACTTAGCCAAGGCAGATGAGAGAATTGGCATACAAATCAGAGTGTTTGAATCTGGAACTGGTCCATTTCAATATGTGATGGATCAAATTTTGGCATGTACTTTCAAGCAAAAGGTGCTGCCTGAAGTTGATAAGCAAGAAACTGTTGTCCCTCCATCAGGAAAGCCACACTTAAAAGCTGTTTTGATGACATCCTTGAGTTTTGGGTACTTTGAGAATTTAAGAAATATGTATTGGGAACAACCCACTGTCACTGGGGATATAATTGGGGTTTATCAGCCAAGCCATGAAGAATTTCAACAGACAGAGAAGCAATTACACAACAGGAAGGCATGGGCAGAAATGTATCTCCTAAGTTTGACTGATGTGTTAGTCACAAGTGCATGGTCAACATTTGGCTATGTGGCTCAAGGTCTTGGAGGTTTGAAGCCATGGATTCTTTATAAACCAGACAATCATACAGCACCAGATCCACCTTGTCGTCGAGTAATGTCAATGGAACCGTGTTTTCATGCTCCCCCATTTTATGATTGCAAGGCAAAGACTGGAATTGATACGGGTAAACTTGTACCTCATGTAAGGCATTGTGAAGATATGAGTTGGGGCCTTAAGCTAGTTGATAGTCATGATGATTTATAG 1629 0.4088 MSFAKIFALCFVAVPLVVTLRLALSYPSSDPNPGFAQARILDKVSRTDTSVAENGSEDGHFESSKMSKDKLLGGLLAPGFDEGSCLSRYESSLYRKTSPHKPSAYLLSKLRSYEELHKRCGPNTESYNKTLKQLQSGQISSSTGSECKYVVWISISGLGNKILTVASAFLYAILTNRVLLVDPGKDMPDLFCEPFPEKSWLLPTDFPLKSKFDMYEQKSPDSYGNMLKNNILNTSAESLPSFLYFHLVHDYGEHDKLFFCDQDQMFFSKVPWLIMKSDNYFVPSLFLIPSFEQELSRLFPNKSTVFHHLGRYLFHPSNQVWGLITRYYQAYLAKADERIGIQIRVFESGTGPFQYVMDQILACTFKQKVLPEVDKQETVVPPSGKPHLKAVLMTSLSFGYFENLRNMYWEQPTVTGDIIGVYQPSHEEFQQTEKQLHNRKAWAEMYLLSLTDVLVTSAWSTFGYVAQGLGGLKPWILYKPDNHTAPDPPCRRVMSMEPCFHAPPFYDCKAKTGIDTGKLVPHVRHCEDMSWGLKLVDSHDDL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi251g00022 542 Pfam Xyloglucan fucosyltransferase 64 509 IPR004938 GO:0008107|GO:0016020|GO:0042546
Sebi251g00022 542 FunFam Galactoside 2-alpha-L-fucosyltransferase 145 196 - -
Sebi251g00022 542 Gene3D - 144 193 - -
Sebi251g00022 542 PANTHER FUCOSYLTRANSFERASE 2-RELATED 26 537 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi251g00022 Sebi-Chr251 746644 749246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi251g00022 1 536 Xyloglucan Fucosyltransferase1 AT2G03220 64.564 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi251g00022 K13681 - cave:132177716 853.973