Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops9g02702 ATGTTGAAGCATGGGTTCTTTGTGGTTTTTATAGTTCTCTATGTGATTCTAGGACATGGGATCTTAGTCCAAGTAGAAGCAGTTGATGATGAGTTTGTGAAAGTGAGAGGAGTGCAGCTTATGTTGGATGAGAGCCCCTACTATGCTAATGGTTTTAATGCATATTGGCTAATGTATGTGGCATATGATCCATCTCAGAGAAACAAGGTGTCATCTGCATTTCAAGAGGCTGCAAACCATGGACTTAATATTGCCAGAGCATGGGCTTTCAGTGATGGAGGACCTAGACCACTACAATACTCTCCCGGATCATACAATGAGGACATGTTTCAGGGGTTGGACTTTGTAATATCTGAAGCCAGAAGATATGGGACAAAGCTGGTGTTGAGTTTGGTGAATAATTATGATGACTTGGGAGGAAAGAAACAATATGTGGACTGGGCAAGAAGTCAGGGCCAGCCCATAAATTCTACAGATGATTTCTACACAAACCCTGTAGTGAAGGAATACTACAAAAACCACATCAAGACTGTTCTTACAAGACGTAATAGCATCACTGGAATTGCTTACAAAGACGATCCAACTATAATGGCTTGGGAGCTCATGAATGAAATTAGATGCCCTTCAGATCAATCAGGAAAAACAGTTCAGGATTGGATTACTGAAATGGCATCTTACCTGAAATCCATAGATGGAAACCACTTGCTGGAAGCTGGTCTTGAGGGCTTCTATGGTCAATCAAAGCAAGATAATAATCCCAACTTCCATGTGGGAACAGATTTCATTGCAAACAGCCAAATCCCTGGCATTGATTTTGCAACAGTTCACTCATACCCAGATCAATGGTTATTAGGTTCAAGTTATGAAGACCAAATCTCATTTTTAAGTCAATGGCTCAATGAGCACATCCAAGATGCCCAGAACGCTATTCAGAAGCCAGTTCTCTTTGCTGAGTTTGGGTTTATAACAAATTCAACAAAAGCCATCGCTTCTGACTCAATACAAAGGGATCAGTTTTTCAGTATGGTCTATTCTGCAATCTATTCATCAGCAAGCAGTGGAGGGGCAGCTGCTGGTGGCTTATTTTGGCAGCTTCTAGTTGAAGGAATGGATAATTTCCAAGATGGTTATGGGGTAGTCTTAGGTAATAGCCCCTCAACAGCTACTTTGATTGCTCAAGAGTCTCAAAAGCTAAACCAAATCCGAAGAAAGTCTCCCTAA 1221 0.412 MLKHGFFVVFIVLYVILGHGILVQVEAVDDEFVKVRGVQLMLDESPYYANGFNAYWLMYVAYDPSQRNKVSSAFQEAANHGLNIARAWAFSDGGPRPLQYSPGSYNEDMFQGLDFVISEARRYGTKLVLSLVNNYDDLGGKKQYVDWARSQGQPINSTDDFYTNPVVKEYYKNHIKTVLTRRNSITGIAYKDDPTIMAWELMNEIRCPSDQSGKTVQDWITEMASYLKSIDGNHLLEAGLEGFYGQSKQDNNPNFHVGTDFIANSQIPGIDFATVHSYPDQWLLGSSYEDQISFLSQWLNEHIQDAQNAIQKPVLFAEFGFITNSTKAIASDSIQRDQFFSMVYSAIYSSASSGGAAAGGLFWQLLVEGMDNFQDGYGVVLGNSPSTATLIAQESQKLNQIRRKSP* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops9g02702 406 FunFam Mannan endo-1,4-beta-mannosidase 6 29 402 - -
Rops9g02702 406 Pfam Cellulase (glycosyl hydrolase family 5) 65 332 IPR001547 GO:0004553|GO:0071704
Rops9g02702 406 SUPERFAMILY (Trans)glycosidases 31 387 IPR017853 -
Rops9g02702 406 Gene3D Glycosidases 28 402 - -
Rops9g02702 406 PANTHER - 14 402 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops9g02702 Rops-Chr9 50772071 50775854 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02702 9 50772071 50775854 Rops9g02702 9 50772071 50775854 ECH
Rops9g02702 9 50772071 50775854 Rops10g02394 10 42079435 42088760 PCT